Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq347 107 4e-18 seq249 84.2 4e-11 >seq347 Length=198302 Score = 107 bits (118), Expect = 4e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| ||||| ||||| ||||| ||||| || || || |||| Sbjct 180053 TACCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAG 180112 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||| ||||| || || || ||||| | | || || ||||| | Sbjct 180113 ACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTG 180172 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| ||||||||||| | || || || || || || || ||| || | Sbjct 180173 GGATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAA 180232 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 | || | || |||||||| || |||| Sbjct 180233 CCTCAAGGGTGATCGTCTTTCCGGTCA 180259 >seq249 Length=210267 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || || | ||| |||||||||||||||| || ||||| ||||| || ||||| ||| Sbjct 84150 CCATCCTCCAATTGCTTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCC 84209 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || ||||| ||||| | || ||||| || || || ||| | || || || | || Sbjct 84210 TTGTCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTG 84269 Query 82773 ATCGTCTTGCCTGT 82786 || |||||||| || Sbjct 84270 ATGGTCTTGCCCGT 84283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814469383068