Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31]
1,012 sequences; 55,125,376 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq347 98.7 2e-15
>seq347
Length=198302
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || || || | ||||| ||| |||||||| ||||
Sbjct 170707 AAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGACACCATCGACAAT 170766
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || ||| || | || ||||||
Sbjct 170767 GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGCCTCATCTTC 170826
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||| |||||||| ||| | || ||| ||| |||||| ||||||| |||||
Sbjct 170827 GCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAACATCCAGAAGGAGTCG 170886
Query 206365 AC 206366
||
Sbjct 170887 AC 170888
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || || || | ||||| ||| |||||||| ||||
Sbjct 180038 AAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGACACCATCGACAAT 179979
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || ||| || | || ||||||
Sbjct 179978 GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGCCTCATCTTC 179919
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||| |||||||| ||| | || ||| ||| |||||| ||||||| |||||
Sbjct 179918 GCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAACATCCAGAAGGAGTCG 179859
Query 206365 AC 206366
||
Sbjct 179858 AC 179857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181805476216052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |