Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq347 98.7 2e-15 >seq347 Length=198302 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || || || | ||||| ||| |||||||| |||| Sbjct 170707 AAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGACACCATCGACAAT 170766 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| ||| || ||| || | || |||||| Sbjct 170767 GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGCCTCATCTTC 170826 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| |||||||| ||| | || ||| ||| |||||| ||||||| ||||| Sbjct 170827 GCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAACATCCAGAAGGAGTCG 170886 Query 206365 AC 206366 || Sbjct 170887 AC 170888 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || || || | ||||| ||| |||||||| |||| Sbjct 180038 AAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGACACCATCGACAAT 179979 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| ||| || ||| || | || |||||| Sbjct 179978 GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGCGCCTCATCTTC 179919 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| |||||||| ||| | || ||| ||| |||||| ||||||| ||||| Sbjct 179918 GCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAACATCCAGAAGGAGTCG 179859 Query 206365 AC 206366 || Sbjct 179858 AC 179857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181805476216052