Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq347 107 2e-18 >seq347 Length=198302 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || |||||||| || || || Sbjct 169116 CTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAA 169057 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | || |||||||||| |||||| ||| | || Sbjct 169056 GATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGT 168998 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || || ||||||||||| || | Sbjct 168997 TGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGA 168938 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 168937 CGAAGATTTGCAT 168925 Score = 102 bits (112), Expect = 7e-17 Identities = 126/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | |||||| || | || || || ||||| || || || Sbjct 170654 TCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 170595 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | || | || |||||||||| |||||| ||| | ||| Sbjct 170594 ATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTT 170536 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | | |||||||| || || ||||| | |||||||| || || |||| Sbjct 170535 GTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 170486 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | |||||| || | || || || ||||| || || || Sbjct 180091 TCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 180150 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | || | | ||||||||| ||||| ||| | ||| Sbjct 180151 ATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTT 180209 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | | |||||||| || || ||||| | |||||||| || || |||| Sbjct 180210 GTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 180259 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || || || |||||| || |||||||| ||| ||| || || |||| || Sbjct 170901 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTC 170842 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| || || || || | ||||||||||| | ||||| | ||||||||| Sbjct 170841 CAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTG 170782 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | ||||| ||||| || || | || || || || Sbjct 170781 GATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTT 170722 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || ||||| || || ||||| Sbjct 170721 GCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || || || |||||| || |||||||| ||| ||| || || |||| || Sbjct 179844 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTC 179903 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| || || || || | ||||||||||| | ||||| | ||||||||| Sbjct 179904 CAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTG 179963 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | ||||| ||||| || || | || || || || Sbjct 179964 GATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTT 180023 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || ||||| || || ||||| Sbjct 180024 GCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787897460960