Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq347 116 4e-21 seq825 87.8 2e-12 >seq347 Length=198302 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||||||||| Sbjct 169151 CCACCACGGAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAG 169092 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || ||||| |||||||| || || || Sbjct 169091 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 169032 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 169031 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACC 168972 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || ||||| || ||||| |||||||| Sbjct 168971 TCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554 || || | ||| | ||| | || || ||||| || ||||||||||||| |||| || | Sbjct 170909 AGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAC-GTACG 170851 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||| || | || || || || || || | |||||||| || || || || ||||| Sbjct 170850 TCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTC 170791 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || ||||| ||| | ||||| || ||||| || ||||| || Sbjct 170790 CTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGT 170731 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || ||||| | || || ||||| |||||||| Sbjct 170730 AATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554 || || | ||| | ||| | || || ||||| || ||||||||||||| |||| || | Sbjct 179836 AGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAC-GTACG 179894 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||| || | || || || || || || | |||||||| || || || || ||||| Sbjct 179895 TCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTC 179954 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || ||||| ||| | ||||| || ||||| || ||||| || Sbjct 179955 CTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGT 180014 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || ||||| | || || ||||| |||||||| Sbjct 180015 AATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | || | ||| || ||||||||||| || ||||||||||| | | Sbjct 180055 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 180114 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | || ||||| || ||||| || || ||||| |||||||| || || || Sbjct 180115 AA-GGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGG 180173 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || |||||||| || ||||| ||| | |||||| || || || Sbjct 180174 GATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAAC 180233 Query 134666 GTCGAGAGTAATGGTTTTACCGGT 134689 || || || || || || ||||| Sbjct 180234 CTCAAGGGTGATCGTCTTTCCGGT 180257 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | || | ||| || ||||||||||| || ||||||||||| | | Sbjct 170690 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 170631 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | || ||||| || ||||| || || ||||| |||||||| || || || Sbjct 170630 AA-GGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGG 170572 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || || || || ||||| ||| | |||||| || || || Sbjct 170571 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAAC 170512 Query 134666 GTCGAGAGTAATGGTTTTACCGGT 134689 || || || || || || ||||| Sbjct 170511 CTCAAGGGTGATCGTCTTTCCGGT 170488 >seq825 Length=464296 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540 ||| | || || | |||||| | |||||||| || || || ||||| || ||||||||| Sbjct 424289 GCCATACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAG 424348 Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 || | |||| | || |||||||| ||||| || || ||||| |||||||| || Sbjct 424349 TCCGATAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCT 424408 Query 134601 GGCGGTATGCCTTCTTTTTCT 134621 || || || ||||| || ||| Sbjct 424409 GGGGGGATTCCTTCCTTGTCT 424429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505392006710240