Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq400 125 1e-23 >seq400 Length=377941 Score = 125 bits (138), Expect = 1e-23 Identities = 416/637 (65%), Gaps = 10/637 (2%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653 || || ||||| || || ||||||||||| | || ||| || ||||| | | | Sbjct 294336 ACGCGCTTCATGAACAGGTCGGGAATCCACA-AGGCATAGAAAAGATCACGAGCACGCGC 294394 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 |||||| || || || ||| | ||||| | | | | | ||| | |||||||| Sbjct 294395 TTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGG 294454 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 || || || || || | | || || || || || || || ||||| | ||| | || Sbjct 294455 CTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGC 294514 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||| | | |||| | ||||| |||| || ||| || ||| | || |||||||| Sbjct 294515 AGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCC 294574 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || ||| | || || || | || || || || || || || | || Sbjct 294575 AATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTT 294634 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || || | ||||||| || | ||||| || |||||||| ||||| || || || | Sbjct 294635 TGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGT 294694 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 || || || || || || | ||| | || || || || || || | |||||| Sbjct 294695 GTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGG 294754 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072 || ||||| ||||| |||| | ||| | | || |||||||| | || || ||||| | Sbjct 294755 GGAGGCGTGCGTGAAGTATTTGTTAGACATGTAG-TTGTATGTCTGTATGGCAGATTCAA 294813 Query 70073 TATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131 | ||| | | | ||||| || | || |||||||| | |||||| || || || || | Sbjct 294814 TGTCCTCTCCG-TGAATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCG 294872 Query 70132 GTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTG 70191 || ||||| | ||||||||| |||||||| || || ||||| || | | Sbjct 294873 ACCTTGCCGCTTATTCGGAGTAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGG 294932 Query 70192 TA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 || ||||| ||||| ||||| | ||| |||| || Sbjct 294933 TAATTGAAA--TCTCTGTCGTATACAATGGCAGAGTT 294967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900110603680