Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq835 91.5 1e-13 >seq835 Length=814277 Score = 91.5 bits (100), Expect = 1e-13 Identities = 290/444 (65%), Gaps = 23/444 (5%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || ||||| | || || |||||| | || ||||||| || ||||| || || ||||| Sbjct 69388 CCGAAAATCATCAACGGACCTGAAGTGTTGAATAAATTCGTTGGTCAGTCTGAGGAAAAC 69329 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548 | || | ||||| ||||| || |||| | | || | |||| || | ||| Sbjct 69328 ATCCGGAAGCTCTTTGCGGACGCAGA-GAAGGAGTATAAGGAGAAGGGAGCCGAG--TCT 69272 Query 19549 TTGC---ACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG------- 19598 ||| |||| || || | || || | || || | || ||||| |||| Sbjct 69271 ATGCTTCACATCATCATTTTTGACGAGCTAGATGCTGTTTGCAAGCAGCGAGGCAGCGGC 69212 Query 19599 --TTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGAC 19656 | ||||| || ||| || |||| || |||||||| || || ||||| |||| Sbjct 69211 AGTGGTGGTGGAACTGGTGTTGGAGACAGCGTAGTCAATCAGCTGCTCTCAAAGCTAGAT 69152 Query 19657 GGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATA 19716 |||||| | | || | || || ||| | ||||||||||| ||| || ||| | || Sbjct 69151 GGTGTTGAAAAGCTTGACAACATCTTACTCATTGGCATGACCAATCGAAAGGACATGATT 69092 Query 19717 GA--CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCG 19774 || ||||| | ||||| | ||||| ||||| | | |||||||| |||| | Sbjct 69091 GATGAAGCGC--TGCTACGAGCTGGTCGACTGGAAGTGCACATCGAAATCGGTCTACCAG 69034 Query 19775 ATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACC 19834 |||| || || || | ||| | ||||| || ||| || | |||| ||||||||| Sbjct 69033 ATGAGGCCGGCCGCGTACAGATTCTCAACATCCACACAGCATCAATGCAGCAAAATAACA 68974 Query 19835 TTTTAAATGACGAT--GTAGATCT 19856 || || || |||| || ||||| Sbjct 68973 TTCTAGAT--CGATCAGTGGATCT 68952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451097877060