Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq347 116 3e-21 >seq347 Length=198302 Score = 116 bits (128), Expect = 3e-21 Identities = 171/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 27009 TCATAATTA-TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAAT 27067 ||| | ||| ||||| || || | || | ||||| || || || || || || || || Sbjct 170931 TCACACTTAGTTGCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGAT 170872 Query 27068 ATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTG 27127 ||||||||||||| | || ||||||| | || || |||||| | ||||| ||||| Sbjct 170871 GTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTG 170812 Query 27128 TTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTC 27187 || || || || | ||| || || || |||||| | || | | || | ||||| Sbjct 170811 CTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTC 170752 Query 27188 TGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||||||| || || |||| ||||| || || || ||||| ||||||||||| Sbjct 170751 AGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Query 27248 A 27248 | Sbjct 170691 A 170691 Score = 116 bits (128), Expect = 3e-21 Identities = 171/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 27009 TCATAATTA-TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAAT 27067 ||| | ||| ||||| || || | || | ||||| || || || || || || || || Sbjct 179814 TCACACTTAGTTGCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGAT 179873 Query 27068 ATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTG 27127 ||||||||||||| | || ||||||| | || || |||||| | ||||| ||||| Sbjct 179874 GTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTG 179933 Query 27128 TTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTC 27187 || || || || | ||| || || || |||||| | || | | || | ||||| Sbjct 179934 CTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTC 179993 Query 27188 TGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||||||| || || |||| ||||| || || || ||||| ||||||||||| Sbjct 179994 AGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 Query 27248 A 27248 | Sbjct 180054 A 180054 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| | || |||||||| || ||| Sbjct 169121 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGCTTGCCG 169062 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | ||||| || || || || | ||||| || || ||||||| | || Sbjct 169061 GCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 169002 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| | ||||| || | || || | |||||||||| ||| Sbjct 169001 ACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTC 168942 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 168941 TTGACGAAGATTTGCATA 168924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929158965344