Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31]
1,012 sequences; 55,125,376 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq400 174 2e-38
seq721 91.5 2e-13
>seq400
Length=377941
Score = 174 bits (192), Expect = 2e-38
Identities = 402/598 (67%), Gaps = 16/598 (3%)
Strand=Plus/Minus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGA----GACA 19171
||||||| || || |||||||| || || || ||| | || || || | ||||
Sbjct 294849 TCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATT----GAATCTGCCATACAGACA 294794
Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231
||| || ||| | || | |||||||||||| | || || ||||||||||| ||
Sbjct 294793 TACAACTACATGTCTAACAAATACTTCACGCACGCCTCCCCTACACTTTTCAACGCAGGC 294734
Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291
|| | ||||| | ||| || ||||| | | | |||||| |||||||| |||
Sbjct 294733 ACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGACAGCATCGAG 294674
Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351
|| |||||||| || |||||| || || || || ||| | || ||||||||
Sbjct 294673 GGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGGTGGTATCGGC 294614
Query 19352 ATCCAC-TGC-TCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAG 19409
| || | | ||| || ||| | | ||| || || || || ||||| |
Sbjct 294613 CTTAACATACATCGCAT--CCGAGCCACTGGATCATACATTGGAGGAACAAACGGCACAT 294556
Query 19410 CCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGG 19469
| ||||| | || || |||||||| ||||| || || || | ||||| | || |
Sbjct 294555 CGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGTTGATCAAG 294496
Query 19470 GGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCA 19529
| ||| ||| || || | ||||||||||||||||||||||||||||| || |||
Sbjct 294495 GTGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCACGCCGATGTCT 294436
Query 19530 TGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGC-TG-TCGCGACCT 19587
| | | | || ||| | |||||| || | || ||| |||| || ||| || ||
Sbjct 294435 TCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGA--AGAAGCGCGTGCTCGTGATCT 294378
Query 19588 CTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATG 19647
||| |||||||||||||| ||||| |||||| || || || || | | || ||
Sbjct 294377 TTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAATGGCGACTG 294318
Query 19648 GCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705
| || |||||||| ||||| |||||||| || |||| ||||||| || | ||||
Sbjct 294317 GACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGACGAGTTC 294260
Score = 163 bits (180), Expect = 3e-35
Identities = 899/1430 (63%), Gaps = 90/1430 (6%)
Strand=Plus/Plus
Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593
|||||| || | |||||| |||||||| ||||||| || | || || | || ||
Sbjct 293435 GTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACCGAGAATTTGAGATGTGGA 293494
Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653
|| || ||||| || || || || || || || |||| ||| ||| ||||||| || |
Sbjct 293495 AGCAGTTGGCATAGGAGCAACAAGAAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGC 293554
Query 78654 CTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707
||| || | |||||| | || | | | || ||||||||| || ||
Sbjct 293555 CTTGAGCGAGTCCCAGTCCCAGAGATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAG 293614
Query 78708 GATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTG-GCGA 78766
||||||| ||| | || || |||| | | || | ||| | | ||| || |||| || |
Sbjct 293615 AATACCCTGGGAAACTGGAGAGCCCTCGTAGGTTTTGTATG-TGCCTTCTTCTTGTGCAA 293673
Query 78767 GTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCT 78826
| | ||| || | || ||| || ||||| | | ||||||||| |||||||||
Sbjct 293674 GCTTGCAGGAAGAGGTCAAGGCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTGAGCT 293733
Query 78827 CGCGCGCCTTGGTCTCGTCGAACGAAAGGCC--GAGCATCATGAAGACATCGGCCAGGCC 78884
|||| || ||||| | |||| ||||| | ||| |||| || || ||
Sbjct 293734 TCTTTGCCTCGGGAGACTCGAAGGGCAGGCGAAGAGCA--AGGAAAGCATCAGCAAGACC 293791
Query 78885 CTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--C 78942
||| || || | | ||| || ||||| || |||||| || | || |||| |
Sbjct 293792 CTGTACACCAACACCGACGGGACGGTGACGGGAGTTGCTGTT---GTATGCTTCGGGAAC 293848
Query 78943 GGG-TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTC 79001
||| || ||| || |||| ||||| ||| || |||| | | || ||
Sbjct 293849 GGGATAGTGGTTGACGTCAATGATCTTGTTCAAGTTGCGAATGACAGTCTGGACGACTTC 293908
Query 79002 GTACAATTTGGCGAAATCAAAATGATTTC-CTTTGA---TGAAAGTCGGTAGGCACAGC- 79056
|| ||| ||| ||||||| | || | | |||| | || | ||| |||| |||
Sbjct 293909 GTGCAACTTGTTGAAATCATA--GACGCCGCGTTGAACGTCAACGAAGGTTGGCAAAGCC 293966
Query 79057 ---GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTG 79113
||||||| |||||| || || ||| || || ||| ||| ||||| || |||
Sbjct 293967 ATGGATGCCAAGTTGCAAACAGCAACCTCATCAGGCGCAGAGTACTCAATGATCTCAGTG 294026
Query 79114 CACAAATTAGA----CGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACA 79169
|||| ||| || ||| ||||| || | ||||||||| |||||||| ||| ||
Sbjct 294027 CACAGATTGGAGCTGCGA----ATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCA 294082
Query 79170 GGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA-GAACGCCGT 79228
|| || ||||| |||| | || | || ||||| ||| ||||| ||| | |||
Sbjct 294083 AGCATCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCGGTCTGGG-CTTGAAGAATGGCGT 294141
Query 79229 CCCAGATGTCCCGGGCCCGGACAA--------------CCTTCTT----GTACC------ 79264
||||| | |||| |||| | ||||||| |||||
Sbjct 294142 ACCAGAGCTTTTGGGCACGGATAGTTTCACGGCCACGGCCTTCTTTCTCGTACCTGGGAG 294201
Query 79265 -----------------------GACCCTGTG-CGACGTACGTCCGGTACAACTCGTTGA 79300
| | |||| | || ||| || ||| | | | ||
Sbjct 294202 CGGTTAGTATTGGCGGTAGTCAAGCACTTGTGGCAACTTACTTCTCGTAGAGAGCTTCGA 294261
Query 79301 AAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGT 79360
| | || || |||| ||||| || || ||||||||||| |||||||| || |||||
Sbjct 294262 ACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGTCCAGT 294321
Query 79361 CCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGT 79420
| | | || || || || |||||| ||||| || ||||||| ||| ||| || |
Sbjct 294322 CGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAAGGCATAGAAAAGAT 294381
Query 79421 CGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGT 79480
| || |||| || || | ||| |||||| | ||| || | ||| | || |
Sbjct 294382 CACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACAT 294441
Query 79481 CGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGT 79540
|||||||||| ||||| || ||||||||||| | ||| |||||| ||| || || |
Sbjct 294442 CGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACCTTGAT 294501
Query 79541 TGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGC 79600
||||| || || || || || || |||||||| || || | |||| | ||
Sbjct 294502 CAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGC 294561
Query 79601 CGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA-GCA-GTGGATTCCGAT 79658
|||| || || || || || | || || ||| ||| | | || | |||||
Sbjct 294562 CGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATG--CGATGTATGTTAAGGCCGAT 294619
Query 79659 GCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGAT 79718
|| || | ||| || || || || |||||| || |||||||| ||||||||
Sbjct 294620 ACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCGAT 294679
Query 79719 CGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGC 79778
||| |||||| | | | |||||||| ||| | || || | || || ||
Sbjct 294680 GCTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGC 294739
Query 79779 GTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTC 79838
|||||| || || || | |||||||||||| | || | ||| | ||| ||||
Sbjct 294740 GTTGAAAAGTGTAGGGGAGGCGTGCGTGAAGTATTTGTTAGACATGTAGTTGTATGTCTG 294799
Query 79839 CTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888
|| | | ||| || ||||| |||||||| || || |||||||
Sbjct 294800 TATGGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGA 294849
>seq721
Length=773014
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
|||||| |||||| | || || ||| || || || ||||||||| ||| | ||
Sbjct 707999 TTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTT 707940
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
|||| ||||||||||| ||||| || |||||||| ||| ||| |||||||||||
Sbjct 707939 GCATCTATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAA 707880
Query 60093 CTGATTTCCCGGGACGAGGG 60112
|| || || || ||||||||
Sbjct 707879 CTCATCTCTCGCGACGAGGG 707860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548517861161280
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