Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq400 138 1e-27 >seq400 Length=377941 Score = 138 bits (152), Expect = 1e-27 Identities = 359/541 (66%), Gaps = 6/541 (1%) Strand=Plus/Minus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||| ||| ||| ||| | || ||||| ||||||||| | || || || ||||||| Sbjct 294798 AGACATACAACTACATGTCTAACAAATACTTCACGCACGCCTCCCCTACACTTTTCAACG 294739 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 | || || ||| || || | ||| |||||||| | | | |||||| ||| | Sbjct 294738 CAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGACAGCA 294679 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 |||| || |||||||| || |||||| ||||| || || ||| | ||||||| Sbjct 294678 TCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGGTGGTA 294619 Query 53424 TCGGTATCCAC-TGC-TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 |||| | || | | ||| | |||| || | || || || || || ||||| Sbjct 294618 TCGGCCTTAACATACATCGCA--TCCGAGCCACTGGATCATACATTGGAGGAACAAACGG 294561 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | | || | || ||||||||||| ||||| || || || || ||||| | Sbjct 294560 CACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGTTGA 294501 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || ||||| ||||| || | |||||||||||||||||||| ||||||||||| Sbjct 294500 TCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCACGCCGA 294441 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 | | | | | || ||| | ||| || || | ||||| ||| ||| |||| Sbjct 294440 TGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCG-TGCTCGTG 294382 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 | || || || |||||||||| ||||| |||||| | || || || | | | Sbjct 294381 ATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAATGGCG 294322 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || |||||||| |||||||||| || || | | |||||||||| |||| Sbjct 294321 ACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGACGAGT 294262 Query 53781 T 53781 | Sbjct 294261 T 294261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209077717600