Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq347 89.7 3e-13 >seq347 Length=198302 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||||||| ||||| || ||||| || || || | || || Sbjct 180064 AGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGG 180123 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||| || ||||| || || || ||||| ||||| || || | ||||||| Sbjct 180124 CCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCC 180183 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTCCACTTCCAC 34664 |||||| ||| || || || ||| | || ||| ||||| ||| || || | Sbjct 180184 TTGTCT-TGAATCTTGGTCTTGACGTTGTCGATGGTG---TCGCTAGACTCAACCTCAAG 180239 Query 34665 GGTTATCGTTTTACCGGT 34682 ||| ||||| || ||||| Sbjct 180240 GGTGATCGTCTTTCCGGT 180257 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||||||| ||||| || ||||| || || || | || || Sbjct 170681 AGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGG 170622 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||| || ||||| || || || ||||| ||||| || || | |||||| Sbjct 170621 CCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCC 170562 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTCCACTTCCAC 34664 ||||| |||| || || || ||| | || ||| ||||| ||| || || | Sbjct 170561 TTGTCCTGGATC-TTGGTCTTGACGTTGTCGATGGTG---TCGCTAGACTCAACCTCAAG 170506 Query 34665 GGTTATCGTTTTACCGGT 34682 ||| ||||| || ||||| Sbjct 170505 GGTGATCGTCTTTCCGGT 170488 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| || ||||| || ||||| || || || | || || || || Sbjct 169127 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCATCCTCGAGCTGC 169068 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || || ||||| ||||| || || | ||||||||||| |||| || Sbjct 169067 TTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATC-TT 169009 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || |||||| ||| || |||| ||| || || || || || Sbjct 169008 GGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGT 168949 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || ||||| Sbjct 168948 CAAAGTCTTGACGAAGATTTGCAT 168925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725718203796