Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq347 132 4e-26 >seq347 Length=198302 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| ||||||| || ||||| ||| | || Sbjct 170692 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 170751 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || || || Sbjct 170752 GACACCATCGACAATGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAG 170811 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||||| | || | |||||| || |||||||||||| | || |||| ||| ||||| Sbjct 170812 CAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGAC-GGACGTACGTTGAGCGACTACAA 170870 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||| || |||||||||||||| || ||||| | ||| | || || |||| Sbjct 170871 CATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCA 170920 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| ||||||| || ||||| ||| | || Sbjct 180053 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 179994 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || || || Sbjct 179993 GACACCATCGACAATGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAG 179934 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC-CGATTACAA 27166 ||||| | || | |||||| || |||||||||||| | || |||| ||| ||||| Sbjct 179933 CAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGA-CGTACGTTGAGCGACTACAA 179875 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||| || |||||||||||||| || ||||| | ||| | || || |||| Sbjct 179874 CATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCA 179825 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||| ||| | || || ||||| || || | |||| | || || | ||||| Sbjct 180259 TGACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGCGACACCATCGACAACGTCAAGA 180200 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||||||||| || || || ||||| || || ||||| || || | |||||||| Sbjct 180199 CCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGCA 180140 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | ||| | ||||| | ||| | || || |||||||| || ||||| || || | | Sbjct 180139 AGCAACTCGAAGATGGCCGCACCTTGTCTGACTACAACATCCAGAAGGAATCCACTCTCC 180080 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | |||||| | ||| | || ||||| || Sbjct 180079 ACTTGGTTCTACGTCTCCGCGGTGGTAT 180052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434912898282240