Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq347 104 2e-17 >seq347 Length=198302 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||| || || || || || ||||||| | || || ||| | | Sbjct 170692 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 170751 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| ||||| || || ||||| |||||| |||| || | Sbjct 170752 GACACCATCGACAAT--GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACC 170809 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || || |||||||| |||||||| |||| ||| | ||| ||| |||| Sbjct 170810 AGCAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACA 170869 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 ||||||| || ||| || ||||| ||||| | ||| | ||||||||| || Sbjct 170870 ACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCAAC 170922 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||| || || || || || ||||||| | || || ||| | | Sbjct 180053 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 179994 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| ||||| || || ||||| |||||| |||| || | Sbjct 179993 GACACCATCGACAAT--GTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACC 179936 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || || |||||||| |||||||| |||| ||| | ||| ||| |||| Sbjct 179935 AGCAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACA 179876 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 ||||||| || ||| || ||||| ||||| | ||| | ||||||||| || Sbjct 179875 ACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGCAAC 179823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858010882124