Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq347 123 2e-23 seq249 116 3e-21 >seq347 Length=198302 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| || || || || || ||||||||||| ||| | Sbjct 170692 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 170751 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || || ||||| |||||| | || ||||| || Sbjct 170752 GACACCATCGACAATGTCAAGAC-GAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCA 170810 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || ||||| || ||| ||||||||| ||| || || |||| ||||| Sbjct 170811 GCAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAA 170870 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || || || || || Sbjct 170871 CATCCAGAAGGAGTCGACCTTGCACTTGGT 170900 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| || || || || || ||||||||||| ||| | Sbjct 180053 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 179994 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || || ||||| |||||| | || ||||| || Sbjct 179993 GACACCATCGACAATGTCAAGAC-GAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCA 179935 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || ||||| || ||| ||||||||| ||| || || |||| ||||| Sbjct 179934 GCAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAA 179875 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || || || || || Sbjct 179874 CATCCAGAAGGAGTCGACCTTGCACTTGGT 179845 >seq249 Length=210267 Score = 116 bits (128), Expect = 3e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| |||||||||||||| || || ||||| || || || || ||| | |||||| | Sbjct 84299 TTTCGTCAAAACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACTAT 84240 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 || ||| | || || || || ||||| || || | |||||||| |||||||| | Sbjct 84239 CGACAATGTCAAGAC-CAAGATCCAAGACAAGGAGGGAATTCCGCCAGACCAACAGCGAT 84181 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 |||| ||||| || || ||| |||| || | ||| || || |||| |||||||| |||| Sbjct 84180 TAATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACCTTGAGCGACTACAACATCCAAA 84121 Query 23798 A 23798 | Sbjct 84120 A 84120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338005431074096