Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq400 165 1e-35 seq721 86.0 9e-12 >seq400 Length=377941 Score = 165 bits (182), Expect = 1e-35 Identities = 449/683 (66%), Gaps = 6/683 (1%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || | |||||||| | | |||||| |||| | | || || ||||| Sbjct 294288 CCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATG 294347 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || || || || ||||| | ||| || ||||| || | | |||||| || || Sbjct 294348 AACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCG 294407 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| | ||||| | | | | | ||| | |||||||| || || || || Sbjct 294408 TGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATG 294467 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | ||||| || || || || || ||||| | || | || || | | | Sbjct 294468 GCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAG 294527 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| |||| || |||||| ||||| || |||||||| ||| || |||| Sbjct 294528 ACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCA 294587 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | ||| | || || || || || |||| || || | ||| Sbjct 294588 GTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCA 294647 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || |||||||||||||| || ||||| ||| || ||| || || || Sbjct 294648 CAAGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCGTGTCAATGAGGAAG 294707 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || || | ||| | ||| || ||||| || || | ||| || || || ||||| Sbjct 294708 CAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTAGGGGAGGCGTGCGTG 294767 Query 78435 AACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 || |||| | ||| | |||| |||||||| | || || ||||| |||||| | || Sbjct 294768 AAGTATTTGTTAGACATGTAG-TTGTATGTCTGTATGGCAGATTCAATGTCCTCTCCGTG 294826 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||| || || || |||||||| | |||||| || || | ||| | ||| |||| Sbjct 294827 AATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCGCTTAT 294886 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 78611 | | | ||||||| |||| ||| || || ||||| || | ||| ||||| ||| Sbjct 294887 TCGGAGTAGGTATGATCGCTCCAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCT 294944 Query 78612 CTCTCGTAAATAATAACAGAATT 78634 || ||||| | ||| |||| || Sbjct 294945 CTGTCGTATACAATGGCAGAGTT 294967 Score = 113 bits (124), Expect = 6e-20 Identities = 377/582 (65%), Gaps = 16/582 (3%) Strand=Plus/Plus Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828 ||||| ||| | || ||||| || || | || || | | || || || |||||||| Sbjct 293045 TTCTTGATCGACAGTGAACTGGATGGGTGCTGAAGCAGCCATGGTTCGGAGGTAGTACAT 293104 Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888 ||||| || ||||||| |||| || || |||||| || | ||| | Sbjct 293105 TCCAGTCTTGAGACCCATCTTCCAACCAGCAAAGTGCATGGAAGTAATCTTGC-----CC 293159 Query 76889 AGGATCGGCT-----ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 | | |||||| || ||||| |||| |||| |||||| ||||| || || | | Sbjct 293160 ATGGTCGGCTCTTTCATGTGAATGTTCAAGCTCTGAGATTGATCAATGAAGGCGCCACGA 293219 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 || || ||||| | |||||||| || |||||||||| || ||| ||| | Sbjct 293220 TCCGCAGCCATGGTGATAATGGTACGCTGGCTGATTTCCCAAACCGTCTTGTAAAGGGCT 293279 Query 77004 TTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTA 77060 ||||||||||| |||| || | | || || || |||||||| |||| || || | Sbjct 293280 TTGATATCATCGGGAATATTAGGAATGTTCTGGATAGAACCACCCTCTGCAATGATACGA 293339 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || | || ||| | | |||| | | || | || || || || Sbjct 293340 TTCTTCATGTTGTCCGACCAAAGACCCATCTCGACGAGATCTTTGAGCAGCCATGGGTTG 293399 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || | ||| ||||| |||| | || | ||||| ||| ||||| || ||||| || Sbjct 293400 ACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGCTCG 293459 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | | || ||| || | |||||||| || ||||||||||||||||| | || ||| Sbjct 293460 AAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAG-CAACAAG 293518 Query 77241 AAACTA-TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAG 77299 || | || | | ||| || | |||| | | | || || | | ||| ||||| || Sbjct 293519 AAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAGAG 293578 Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 ||| | ||| || | ||| | ||||| || ||||| || Sbjct 293579 ATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAGAATACC 293620 >seq721 Length=773014 Score = 86.0 bits (94), Expect = 9e-12 Identities = 168/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||| || || ||||| || || || ||||| |||||||| |||| ||||||| | | Sbjct 708191 TCGGAATGGATGTTTTCCATGGCGATTTGAAAACCGTAAAAGCATCGGGCTTCTGGAACC 708250 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||| ||||| | ||||| || || || ||||| || || Sbjct 708251 TGAACTTCGTTGCTAAAACGTTCGAGGAGGTTCTCGTTGACGATGCCATCCGATGCTGCG 708310 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614 |||||||| | | ||| || ||| | ||||| | |||| || |||||| Sbjct 708311 AAAAATGCGAGAATGTGTGAGATGAAAAAGCGTTCGTCGTCGTTCAGGCGGTTGTTCCAG 708370 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | ||||| || | ||| | ||||| || ||||||||||| ||| ||| || Sbjct 708371 TCTGGAACGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAATGAGGCCATTGCCTTC 708430 Query 48675 TTATACAT 48682 || ||||| Sbjct 708431 TTGTACAT 708438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660012439680