Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq347 114 3e-20 seq825 89.7 1e-12 seq249 84.2 5e-11 >seq347 Length=198302 Score = 114 bits (126), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || ||||||||||| ||| || || | || ||||| | ||||| | Sbjct 170888 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTT--C 170831 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| || | ||||||||| | | || |||||||| || || || || | Sbjct 170830 CGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCT 170771 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 ||||| | || | | |||| || || ||||| || |||||||| ||||| ||||| | Sbjct 170770 TGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGG 170711 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||||||||||| ||||| Sbjct 170710 TCTTCACGAAGATTTGCAT 170692 Score = 114 bits (126), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGCTTTTCC 151965 || ||||| || ||||||||||| ||| || || | || ||||| | ||||| | Sbjct 179857 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAATTGCTTT--C 179914 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| || | ||||||||| | | || |||||||| || || || || | Sbjct 179915 CGGCGAAGATGAGGCGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCT 179974 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 ||||| | || | | |||| || || ||||| || |||||||| ||||| ||||| | Sbjct 179975 TGACATTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGG 180034 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||||||||||| ||||| Sbjct 180035 TCTTCACGAAGATTTGCAT 180053 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| ||||| || ||||| || ||||||||||| || | | || | Sbjct 169143 GAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCG 169084 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| | | ||||||||| | | ||| || || Sbjct 169083 TCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCCCTC 169024 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | ||||||| ||| || || | || Sbjct 169023 CTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGT 168964 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| | |||||| ||||||| ||||| Sbjct 168963 GATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| | | ||||||||| | | |||||| ||||| |||||||| || Sbjct 169295 TTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTG 169236 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||| | || | | ||||||| ||| || || | || || || |||||||| Sbjct 169235 GTCTTGACGTTGTCGATGGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTC 169176 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| ||||||| ||||| Sbjct 169175 AAAGTCTTGACGAAGATTTGCAT 169153 Score = 86.0 bits (94), Expect = 1e-11 Identities = 130/184 (71%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || || ||||||||||| || | || || | |||||||| | Sbjct 180075 CAAG-TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCTTCGA 180133 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| | | ||||||||| | | |||||| ||||| ||||||| Sbjct 180134 GTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAA 180193 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| | ||| || ||||| || || || || | Sbjct 180194 TCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTC 180253 Query 152077 CCGT 152080 | || Sbjct 180254 CGGT 180257 >seq825 Length=464296 Score = 89.7 bits (98), Expect = 1e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| |||||| || || || || ||||| || ||||||||||| || | || || | Sbjct 424303 GAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCG 424362 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || ||||||||||| | | ||||||||| | | ||||||||| Sbjct 424363 TCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTC 424422 Query 152006 CTTTTCT 152012 ||| ||| Sbjct 424423 CTTGTCT 424429 >seq249 Length=210267 Score = 84.2 bits (92), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GGC 151959 |||| ||| | | | |||||||||||||| ||| || || | ||||| || | || Sbjct 84106 TGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGC 84164 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || || ||||| | | ||| ||||| | || ||||| ||||| ||||| || | Sbjct 84165 TTT--CCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCT 84222 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 | |||||| | || | |||| || ||| || ||||| || || || ||||||| Sbjct 84223 TGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCG 84282 Query 152080 TGAGAGTCTTCACGAA 152095 |||| || || ||||| Sbjct 84283 TGAGGGTTTTGACGAA 84298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153805839271052