Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq347 168 1e-36 seq249 141 2e-28 seq825 84.2 5e-11 >seq347 Length=198302 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||| || || |||||||||||||| | Sbjct 169152 ACCACCACGGAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGA 169093 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || ||||| |||||||| || || ||||| || Sbjct 169092 GAGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGG 169033 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| ||||| || | || || Sbjct 169032 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAAC 168973 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||||||||| ||||| || ||||| Sbjct 168972 CTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| || || || || |||| || | ||| ||| || |||||||||||||||| Sbjct 170691 ACCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGA 170632 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||||||||| || ||||| || ||||| |||||||| || || ||||| | Sbjct 170631 CAAG-GTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTG 170573 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||||||||| |||||||| | || ||| | ||||| ||||| || || | Sbjct 170572 GGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAA 170513 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | || || ||||||||||| || |||| Sbjct 170512 CCTCAAGGGTGATCGTCTTTCCGGTCA 170486 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| || || || || |||| || | ||| ||| || |||||||||||||||| Sbjct 180054 ACCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGA 180113 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||||||||| || ||||| || ||||| |||||||| || || ||||| | Sbjct 180114 CAAG-GTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTG 180172 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || |||||||||||||| ||||| | || ||| | ||||| ||||| || || | Sbjct 180173 GGATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAA 180232 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | || || ||||||||||| || |||| Sbjct 180233 CCTCAAGGGTGATCGTCTTTCCGGTCA 180259 Score = 131 bits (144), Expect = 4e-25 Identities = 129/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || ||||| |||||||| || || ||||| || Sbjct 169319 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 169260 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||| ||||| | || ||| | ||||| ||||| || | || || Sbjct 169259 ATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAACC 169200 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||||||||| ||||| || ||||| Sbjct 169199 TCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 169153 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || || || || || |||||||||||||| Sbjct 170918 CCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 170859 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| || || || || | ||| || ||||| ||||| | || || ||||| ||| Sbjct 170858 AACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 170799 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| |||||||| | || || | ||||| ||||| || | ||| ||| Sbjct 170798 ATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACT 170739 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 170738 TCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 170692 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || || || || || |||||||||||||| Sbjct 179827 CCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTC 179886 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| || || || || | ||| || ||||| ||||| | || || ||||| ||| Sbjct 179887 AACGTACGTCCGTCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGA 179946 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| |||||||| | || || | ||||| ||||| || | ||| ||| Sbjct 179947 ATACCTTCCTTGTCCTGGATCTTCGTCTTGACATTGTCGATGGTGTCAGAGGATTCAACT 180006 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 180007 TCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 180053 >seq249 Length=210267 Score = 141 bits (156), Expect = 2e-28 Identities = 141/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTC-AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGAT 282970 ||||||||||||||||| |||| || || |||||||| | ||| || || |||||||| Sbjct 84120 TTTTGGATGTTGTAGTCGCTCAAG-GTACGTCCATCCTCCAATTGCTTTCCAGCAAAGAT 84178 Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030 || || |||||||| |||||| |||||||||||||||||||| | || || | || Sbjct 84179 TAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTC 84238 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||||||||| || | ||||| || || ||||| ||||| ||||| | || || ||||| Sbjct 84239 GATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGACGAA 84298 >seq825 Length=464296 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 424294 ACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 424353 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || || || ||||| |||||||| || || ||||| || Sbjct 424354 TAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGG 424413 Query 282992 AATACCCTCCTTGTCT 283007 || || ||||||||| Sbjct 424414 GATTCCTTCCTTGTCT 424429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046725627717848