Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq347 150 4e-31 seq825 93.3 1e-13 >seq347 Length=198302 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || || || |||||| | ||||| || |||||| Sbjct 168928 CAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCAGAC 168987 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 168988 ACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAGCAG 169047 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || |||||||| |||||| | || || | || || ||| || Sbjct 169048 CGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACCCTCTCAGACTACAACATC 169107 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || ||||| Sbjct 169108 CAGAAGGAGTCCACACTTCACCTTGT 169133 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || ||||| || || || || || ||||| || ||| ||| ||| Sbjct 170695 CAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGAC 170754 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct 170755 ACCATCGACAATGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAG 170814 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| || | ||||| ||| | || | ||| || ||| || Sbjct 170815 CGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAACATC 170874 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 170875 CAGAAGGAGTCGACCTTGCA-CTTG 170898 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || ||||| || || || || || ||||| || ||| ||| ||| Sbjct 180050 CAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCTGAC 179991 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct 179990 ACCATCGACAATGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAG 179931 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| || | ||||| ||| | || | ||| || ||| || Sbjct 179930 CGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGACGTACGTTGAGCGACTACAACATC 179871 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||| |||| Sbjct 179870 CAGAAGGAGTCGACCTTGCA-CTTG 179847 Score = 134 bits (148), Expect = 3e-26 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || || || |||||| | ||||| || |||||| Sbjct 169156 CAAATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCAGAC 169215 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||| || |||||||| || |||||||| Sbjct 169216 ACCATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAG 169275 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || | ||||||||||| || |||||||| |||||| | || || Sbjct 169276 CGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGACGCACCCT 169319 Score = 132 bits (146), Expect = 1e-25 Identities = 147/191 (77%), Gaps = 9/191 (5%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || ||||| ||||||||||| ||||| || ||| ||||||||||| |||||||| Sbjct 180257 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGC---GACACCATCGACAACGTCAAG 180201 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 |||||||| ||||| || |||||||| || |||||||| || | ||||||||||| Sbjct 180200 ACCAAGATTCAAGACAAGGAGGGAATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGC 180141 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACT 178120 || || ||||||||||| | || |||| | || || ||| |||| || ||||| || || Sbjct 180140 AAGCAACTCGAAGATGGCCGCAC-CTTGTCTGACTACAACATCCAGAAGGAATCCACTCT 180082 Query 178121 GCATCTTGTTT 178131 || |||| || Sbjct 180081 CCA-CTTGGTT 180072 Score = 127 bits (140), Expect = 5e-24 Identities = 146/191 (76%), Gaps = 9/191 (5%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCATCGAGAACGTCAAA 178001 || ||||| ||||||||||| ||||| || ||| ||||||||||| |||||||| Sbjct 170488 ACCGGAAAGACGATCACCCTTGAGGTTGAGTCTAGC---GACACCATCGACAACGTCAAG 170544 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || | ||||||||||| Sbjct 170545 ACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAGCAGCGCTTGATCTTCGCCGGC 170604 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACT 178120 || || ||||||||||| | || |||| | || || ||| |||| || ||||| || || Sbjct 170605 AAGCAACTCGAAGATGGCCGCAC-CTTGTCTGACTACAACATCCAGAAGGAATCCACTCT 170663 Query 178121 GCATCTTGTTT 178131 || |||| || Sbjct 170664 CCA-CTTGGTT 170673 >seq825 Length=464296 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||||||||| || |||||||| || | ||||||||||| || ||||||||| Sbjct 424428 GACAAGGAAGGAATCCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAA 424369 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||||| | || || | || || ||| |||| || || || || || || || || Sbjct 424368 GATGGACGCACCCTATCGGACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGT 424313 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||||||||||||||||| ||| ||| Sbjct 424570 CAGATTTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCCTCCGAC 424511 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGG 178014 ||||| || || ||||| |||||||||| Sbjct 424510 ACCATTGACAATGTCAAGACCAAGATTCAGG 424480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715592120328