Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F001857725.1_202016-10-31] 1,012 sequences; 55,125,376 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq347 138 1e-27 seq825 98.7 9e-16 >seq347 Length=198302 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||| ||||| ||||| ||| Sbjct 169151 CCACCACGGAGGCGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAG 169092 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| |||| |||||| ||||| | || Sbjct 169091 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 169032 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 169031 ATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTGTCGATGGTGTCTGATGACTCAAC 168973 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || ||||||| ||||| ||||| || ||||| Sbjct 168972 CTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 168925 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||||| |||| || || ||| |||||||| ||||| ||||| || Sbjct 170690 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 170631 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||| |||||||||||||| |||| |||||| ||||| | || Sbjct 170630 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 170571 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||||| ||||| || Sbjct 170570 ATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTGTCGATGGTGTCGCTAGACTCAAC 170512 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || ||||| || || |||| Sbjct 170511 CTCAAGGGTGATCGTCTTTCCGGTCA 170486 Score = 116 bits (128), Expect = 3e-21 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||||| |||| || || ||| |||||||| ||||| ||||| || Sbjct 180055 CCACCGCGGAGACGTAGAACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 180114 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||| |||||||||||||| |||| |||||| ||||| | || Sbjct 180115 AAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 180174 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | || | | ||| | | | |||||||| ||||| || Sbjct 180175 ATTCCCTCCTTGT-CTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAAC 180233 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || ||||| || || |||| Sbjct 180234 CTCAAGGGTGATCGTCTTTCCGGTCA 180259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| |||| |||||| ||||| | || Sbjct 169319 AGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 169260 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | || | | ||| | | | ||||| ||||| || Sbjct 169259 ATTCCCTCCTTGT-CTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCTGATGACTCAAC 169201 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || ||||||| ||||| ||||| || ||||| Sbjct 169200 CTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCAT 169153 >seq825 Length=464296 Score = 98.7 bits (108), Expect = 9e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||| || |||||||| | || |||||||||||||||||||| Sbjct 424330 CTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAA 424389 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 |||| |||||| ||||| | ||| | | |||||||| Sbjct 424390 GATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTC 424428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298151854400