Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq597 253 2e-62 seq110 122 8e-23 seq264 111 1e-19 >seq597 Length=589508 Score = 253 bits (280), Expect = 2e-62 Identities = 634/951 (67%), Gaps = 18/951 (2%) Strand=Plus/Minus Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGC 23308 ||||| | ||| | || || || ||| ||||||| ||||| || || || | | Sbjct 282616 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 282557 Query 23309 ATCGGACACATGAGACTCCACATTG--AGTCATTTTCAACGCGTCTCATAAAAAGATCCG 23366 || ||||||||| |||| | | | || | ||| ||||| |||| || || || | Sbjct 282556 TGAGGGCACATGAGAGTCCAG-TCGCCATTC-TGTTCGACGCGCTTCATGAACAGGTCGG 282499 Query 23367 GTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTT 23426 | ||||| | || ||||| || || || || ||| | || ||||||||| ||||||| Sbjct 282498 GAATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTC 282439 Query 23427 TCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGC 23486 ||| ||| || ||| || || || || ||||| ||||||||||| | ||| || || | Sbjct 282438 TCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCAC 282379 Query 23487 CCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCA 23546 | || | ||| ||||| || ||||| ||||| || || || || | || | |||| Sbjct 282378 CAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCA 282319 Query 23547 TCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAA 23606 | || || |||||||| || | |||| | || | | || || | ||||| | Sbjct 282318 TAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGA 282259 Query 23607 CGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCA 23666 | || | || | || || || || | | || || ||||| || || || | Sbjct 282258 TGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGA 282199 Query 23667 GAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACA 23726 | ||||||||||| |||||||| |||||||| || || | | | ||| || || || | Sbjct 282198 GGGTGTCGTAGATACCCTCGATACTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGA 282139 Query 23727 TTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCAT 23786 ||||| || || || | || ||| ||||| ||| ||||||||| |||||| | Sbjct 282138 GTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGGGGAGGCGTGCGTGAAGTATTTGT 282079 Query 23787 TCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATG 23845 | ||||| ||| |||||||| | || || | ||||||||||||||||| || |||| Sbjct 282078 TAGACATGTAG-TTGTACGTCTGAATAGCAGATTCAATGTCCTCTCCGTGAATGCCGACT 282020 Query 23846 GCGACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAAC 23902 || || ||||| ||||| | ||| || | || ||||| | |||| | ||| || Sbjct 282019 GCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTT---GCCGCTTATTCGGAGT 281963 Query 23903 AGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGC 23962 || ||||| || | || || || || ||||| || | || || || || | |||| Sbjct 281962 AGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAATTGAAATCTCTGTCGTAT 281903 Query 23963 ACTATGGCCGAATTCAAACGGTACGCATTGGCAGC--GATGATGTTGTAATGAAAATTCG 24020 || ||||| || ||||| | ||||| || | || | ||||||| | | || Sbjct 281902 ACAATGGCAGAGTTCAACTCATCCGCAT--GCTTCATGACGGTGTTGTATGTGATGTCCG 281845 Query 24021 ATATCATCGGCGTTTTAACGCCGGTCTTTGGATCGATCGCTTCATACATATCGATAATGA 24080 | ||||| || ||| | | ||||||| | ||| || || | || |||| Sbjct 281844 AAATCATAGGGCATTTCTTGTTGTTCTTTGGGTTGATATAATCGTAGAGGTCTTGGATGA 281785 Query 24081 CATC-GAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAGACACGGCCAATCTAGCCGCA 24139 || | || || | || || || | |||||| | ||| || ||||| | | || ||| Sbjct 281784 CAGCAGAGAACTGCTTC-TTGGTTTGCTTGTGAAGATTTGATACGGCGATACGTGCTGCA 281726 Query 24140 AGCAACGAATAGTCGGAATGATCGATGGTCATGGCCGCTGCCGTCTCGGCG 24190 || | | ||||||| ||| || ||||||| |||||| ||||| ||| Sbjct 281725 AGGATTGCGTAGTCGGGATGTGTGACGGTCATGTACGCTGCTGTCTCAGCG 281675 >seq110 Length=125662 Score = 122 bits (134), Expect = 8e-23 Identities = 282/420 (67%), Gaps = 10/420 (2%) Strand=Plus/Minus Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 |||| ||||| || ||||| ||||| ||||| ||| |||||| | || || ||| Sbjct 62719 TCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTTGCATCTATCTTCTGGC 62660 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 | ||||| ||||| || ||||||||| |||| || |||||| | || || ||||||| Sbjct 62659 TCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTTATCTCTCGCGACG 62600 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| | || || || ||||| ||||| | | ||| || | ||| || || ||| Sbjct 62599 AGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAACAAGAAGCCTTCGC 62540 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 || | || | ||| ||||||||||| || || || | || || | | || Sbjct 62539 CTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATTCTTGAGCG 62480 Query 58219 AAGCCCTACCGGTGGCCA-TGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 |||| |||| ||| | ||||||| |||||| | | |||| ||||||| ||| Sbjct 62479 AAGCATTACC-GTGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTACATCGAG 62421 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA----TTACAACACGAA 58333 |||||||| || | || ||||| | | |||| | |||| ||||||| | Sbjct 62420 TTTGTTGCTGATCGTCTCTTGCTTG---CGCTTGG-CAATGTCAAGGTTTACAACGCCGT 62365 Query 58334 AAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || || ||| | || || || | || ||||| ||||||||||| || Sbjct 62364 CAACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAAGACTAACTTTTTCGAGAA 62305 Score = 107 bits (118), Expect = 2e-18 Identities = 196/284 (69%), Gaps = 5/284 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| ||||||||| |||||| || || |||||||||| |||||| | || || Sbjct 63183 ATCTGGCGCATGTACAAGAAGGCAATGGCCTCATTTTGGACCGCCGAAGAGATCGATCTC 63124 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGAGAGAAATTTTATTAAA 57686 || || || | || ||| | || | || || || | ||| || | Sbjct 63123 TCCAAAGACGTTCCAGACTGGAACAACCGCCTGAACGACGACGAACGCTTTTTCATCTCA 63064 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | | || |||||||| ||||| ||||| || || |||||||| | ||||| | Sbjct 63063 CACATTCTCGCATTTTTCGCAGCATCGGATGGCATCGTCAACGAGAACCTCCTCGAACG- 63005 Query 57747 TTTTCACAA-GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 |||| ||| ||||| || || | || || ||||||||||||| |||||| | ||||| Sbjct 63004 TTTTAGCAACGAAGTTCAGGTTCCAGAAGCCCGATGCTTTTACGGTTTTCAAATCGCCAT 62945 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGT 57849 |||||| | ||||| || | || || || || ||||| |||| Sbjct 62944 GGAAAACATCCATTCCGAGACATACTCCCTCCTGATCGAGACGT 62901 >seq264 Length=644297 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || || || |||| |||||| | || Sbjct 590766 ATGCAAATCTTCGTGAAGACCCTCACCGGCAAGACTATTACACTCGAAGTTGAATCCTCT 590707 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || |||||||||||| | || || || ||| Sbjct 590706 GACACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCAG 590647 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||||| || || ||||| || || ||||||||||| | | | || ||||||| || || Sbjct 590646 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAAGA-TGGACGTACGTTGAGCGACTACAA 590588 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || || || ||||| Sbjct 590587 CATCCAGAAGGAGTCGAC 590570 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| ||||| || |||||| | || ||||| | || Sbjct 590994 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 590935 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || || || ||| | ||||||||| || | || || ||||| Sbjct 590934 GACACTATCGACAATGTTAAGACCAAGA-TCCAGGACAAGGAGGGTATCCCACCAGACCA 590876 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||| ||||| || | ||||| || || ||| || || Sbjct 590875 GCAGCGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCTTGTCCGACTACAA 590816 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| ||||| || |||| || Sbjct 590815 CATCCAGAAGGAATCCACTCTCCACTTGGTCCT 590783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760605036800