Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq264 122 8e-23 seq520 102 7e-17 >seq264 Length=644297 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| || ||||||| || ||| || Sbjct 590557 CACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCATCTTC 590616 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| |||||| | ||||| | | ||||||||||||||||||||||| ||||| | Sbjct 590617 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTG 590676 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | ||||||| | ||| ||||||| | || || || | || || || || Sbjct 590677 GATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTT 590736 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| ||||| ||||| Sbjct 590737 GCCGGTGAGGGTCTTCACGAAGATTTGCAT 590766 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| |||||||| || | ||| || ||| || ||| | ||| || Sbjct 590786 ACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCA 590845 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || ||| | ||||| || | ||||| ||||| || ||||| || ||||| | Sbjct 590846 AGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGG 590905 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| || | ||| |||||| | || || || | |||||||| || Sbjct 590906 ATCTTGGTCTTAACATTGTCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTG 590965 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| || || ||||||||||| Sbjct 590966 CCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 >seq520 Length=276588 Score = 102 bits (112), Expect = 7e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877 ||||||| | ||| || ||||||| || |||||||| || ||||| |||||| Sbjct 100393 CCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGCTTTCCAGCAAAGA 100452 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 |||||| || || ||||| ||||| || || ||||| | || || | |||||| | Sbjct 100453 TTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGT 100512 Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997 ||| |||||||| | ||||| |||| |||||||| || || || || ||||| || | Sbjct 100513 CGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGACGA 100572 Query 94998 A 94998 | Sbjct 100573 A 100573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285372214400