Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq597 219 1e-51 >seq597 Length=589508 Score = 219 bits (242), Expect = 1e-51 Identities = 1154/1828 (63%), Gaps = 87/1828 (5%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| ||| |||||| || || | || | | | ||| || || || Sbjct 281940 AAGACCCTGGAGCGATCATACCTACTCCGAATAAGCGGCAAGGTCGCTGAGCGTCCACAA 281999 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 |||||| | |||||||| || | || || || | ||| |||| | || ||| | Sbjct 282000 CATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATTGAATCTGCTATTCAG 282059 Query 363520 ACATATAAGCTTCTAAGTGCT--CGTGTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || || || | | || || | || |||||||||||| | || ||| | | ||| Sbjct 282060 ACGTACAA-CTAC-ATGT-CTAACAAATACTTCACGCACGCCTCCCCCACACTTTTCAAC 282116 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || || || | | | || || | || |||||||| || | | | |||||| || Sbjct 282117 GCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGACAGT 282176 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||||||||||| ||||| || |||| ||||||| | ||||| |||| || || || Sbjct 282177 ATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGGTGGT 282236 Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGGCACAGGGG 363754 || || | || || | || || || | | || |||||| | || ||| | Sbjct 282237 ATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCA--TACATTGGAGGAACAAACG 282294 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | ||||| || || ||||| ||||| ||||| |||||| ||||| | ||||| | Sbjct 282295 GCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGTTG 282354 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 | || ||||| ||||| || || || || || || |||||||| || |||| Sbjct 282355 ATCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCACGCCG 282414 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 || | || | | | || || | || ||| || ||||| ||| |||||| |||| Sbjct 282415 ATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCGTGCTCGTG 282474 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA 363994 |||| |||||||| | ||| || | |||| || ||||||||||| || ||| | Sbjct 282475 ATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAA-CAGAATGGC 282533 Query 363995 -ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGAC 364053 | ||| | ||| | ||||| ||||| || || |||||| ||||| | | |||||||| Sbjct 282534 GACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGACGAG 282593 Query 364054 TATGTTGCTCTATACGAAAAGTATG--------------------------------AAT 364081 | | ||||| ||||| ||||| | || Sbjct 282594 TTCGAAGCTCTCTACGAGAAGTAAGTTGCCCCGAAGTGCTTGACTACCGCCAATACTAAC 282653 Query 364082 CGG----AGGGA--------AAGGCT-----CGTAAGACAATTCCCGCACAGAAGCTATG 364124 || ||| | ||||| ||| | || || | ||| || ||||| || Sbjct 282654 CGCTCCCAGGTACGAGAAAGAAGGCCGTGGCCGTGAAACTATCCGCGCCCAAAAGCTCTG 282713 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATT 364183 || ||||| | | | |||| ||||| || | ||||| | ||| | ||||||||| Sbjct 282714 GTACGCCATTCTTCAAGCCCAGACCGAGACTGGCA-ACCCTTTCATGCTTTACAAAGATG 282772 Query 364184 CGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGT 364242 | |||||||||||| ||| ||| || || | || || |||| | || | || || || Sbjct 282773 CTTGCAACCGCAAGAGCAATCAGAAGAACTTGGGAACCATTC-GTAGCTCCAATCTGTGC 282831 Query 364243 ACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATC 364302 || ||||| ||||| ||| | || || || ||| || || || ||| | || || || Sbjct 282832 ACTGAGATCATTGAGTACTCTGCGCCTGATGAGGTCGCTGTTTGCAACTTGGCATCCATG 282891 Query 364303 GCGCTTCCGGCGTTTGTAAAAGAT------GGTACTTTTGA---CCACCAGCATCTTTAT 364353 || | || | || || | | | || | ||| | || || | | Sbjct 282892 GCTTTGCCAACCTTCGTTGACGTTCAACGCGGCGTCTATGATTTCAACAAGTTGCACGAA 282951 Query 364354 GACGT--AACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411 | ||| || || |||| | |||| | ||||| | || ||| || | || | Sbjct 282952 GTCGTCCAAACTGTCATTC-----GCAACTTGAACAAGATCATTGACGTCAACCACTACC 283006 Query 364412 CAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGG 364471 | |||| ||||| | || ||||| || || | ||| |||||||||||| Sbjct 283007 CCGTTCCCGAAGCATACAACAGCAACTCCCGTCACCGTCCCGTCGGTGTTGGTGTACAGG 283066 Query 364472 GCCTCGCTGACGTTTTTATGATGCTCAAGA--TGGCATTTGATTCGCCTGACGCTCGTGT 364529 | || || || | ||| | ||||| || | || || || || || || Sbjct 283067 GTCTTGCGGATGCTTTCCT--TGCTCTTCGCCTGCCCTTCGAGTCTCCCGAGGCAAAGAA 283124 Query 364530 TCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTT 364589 || || | | ||||| || || || || |||||| |||| |||| || | | Sbjct 283125 GCTTAACATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTCTTCCTGCAAGCT 283184 Query 364590 GGCAAAA-ACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAAT 364648 ||| || | |||| | | ||| || || ||||| || || |||| ||||| | Sbjct 283185 TGCACAAGAAGAAGGCACA-TACAAAACCTACGAGGGCTCTCCAGTTTCCCAGGGTATTC 283243 Query 364649 TCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTT 364708 |||||| || | ||||| ||||| || | | | ||| ||||||| |||| Sbjct 283244 TCCAGTACGACATGTGGAACGTCACTCCTACGGATCTCTGGGACTGGGACTCGCTCAAGG 283303 Query 364709 CCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTT 364768 | | | |||||||| |||| ||||||||| || || || || ||||| || |||| Sbjct 283304 CTGATATCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTCCTATGCCAACTGCTT 283363 Query 364769 CTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATT 364828 | || | || || ||||| ||||||||||||||| || | || ||| | || | Sbjct 283364 CCACATCTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACACGTCAAATATCTACT 283423 Query 364829 CACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTT 364888 | || || || ||| | || ||||| | || || || | || |||| ||||| Sbjct 283424 CTCGTCGTGTGCTTGCTGGGGAATTCCAAGTCGTCAACCCATGGCTGCTCAAAGATCTCG 283483 Query 364889 CCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTG 364948 ||| || || ||| |||| ||||||||| |||||| || | ||||||| Sbjct 283484 TCGAGATGGGTCTTTGGTCGGACAACATGAAGAATCGTATCATTGCAGAGGGTGGTTCTA 283543 Query 364949 TGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAA 365008 | ||||||||||| |||| || ||| | ||| | ||||||| || || ||||||| Sbjct 283544 TCCAGAACATTCCTAATATTCCCGACGATATCAAGGCCCTTTACAAGACGGTTTGGGAAA 283603 Query 365009 TTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCC 365068 | | ||| || | || ||||| || ||||| || || || || ||| | Sbjct 283604 TCAGCCAGCGTACCATTATCACCATGGCTGCGGATCGTGGCGCCTTCATTGATCAATCTC 283663 Query 365069 AGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCT 365128 || || ||| | ||||| |||| ||| | |||| |||| || ||||| || Sbjct 283664 AGAGCTTGAACATTCACATGAAAGAGCCGACCATGGGCAAGATTACTTCGATGCACTTTG 283723 Query 365129 ACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || ||||| ||||| ||||| || Sbjct 283724 CTGGTTGGAAGATGGGTCTCAAGACTGG 283751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303336232813280