Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq110 132 5e-26 seq264 118 1e-21 seq597 105 6e-18 seq265 98.7 9e-16 >seq110 Length=125662 Score = 132 bits (146), Expect = 5e-26 Identities = 346/513 (67%), Gaps = 11/513 (2%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | |||||||| |||||||||| |||||||||| | || | | || Sbjct 62795 CCCTGCATCCGCAAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGATGACAACTCTACC 62736 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || || |||| | || || || || ||| ||||| |||| || ||| ||| Sbjct 62735 TTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTTT 62676 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 || | ||||| | |||| || | || | ||||||||||| |||| || |||||| Sbjct 62675 GCATCTATCTTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGCTTGACCTTCTCCAACGA 62617 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCG 46325 || || || ||||||||||| |||| || |||||||| || ||| || | ||| | Sbjct 62616 ACTTATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCT-TCTCAC-AG 62559 Query 46326 CGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCAT 46385 | | || | |||| | |||| || |||| | ||| ||| ||||| || || Sbjct 62558 C-TCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAAT 62500 Query 46386 TGAGAAGGAGTTTTTTACGGCCGCACTGCC-CGCTGCCCTGCTGGGCATGAACGC-ACAG 46443 |||| |||| || || | | ||| | || || | |||| ||||||||| | || Sbjct 62499 TGAGCAGGAATTCTTGAGCGAAGCATTACCGTGCAG-ATTGCTCGGCATGAACTCTACCC 62441 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCT-CGTGCAGCTTCACCAGCC 46502 || |||||| | |||||||||||||| || || || || | | ||| |||| | | Sbjct 62440 TC-ATGTGCCAGTACATCGAGTTTGTTGCTGATCGTCTCTTGCTTGC-GCTTGGCAATGT 62383 Query 46503 GAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562 ||| || |||| ||| || || || || ||| | ||||| || || | || || Sbjct 62382 CAAGGTTTACAACGCCGTCAACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAA 62323 Query 46563 AACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| |||||||| ||||||||||| || || Sbjct 62322 GACTAACTTTTTCGAGAAGCGCGTCGGTGATTA 62290 >seq264 Length=644297 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| ||||| || || | |||||||||||| || |||||||| ||||| Sbjct 590539 GCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCT 590598 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || || || | |||||| || ||| |||| | |||||||| || ||||| Sbjct 590599 CAACGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGG 590658 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| ||| ||||| | || | || || | ||| || | Sbjct 590659 AATACCTTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAAC 590718 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| || || || ||||| || ||||| Sbjct 590719 TTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 590766 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || || || | || || ||||| || |||||||| ||| | Sbjct 590768 CCACCGCGGAGACGTAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 590827 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || |||||||| ||| |||| || ||||||||||| || ||| Sbjct 590828 AAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 590887 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||| || | ||||| | Sbjct 590888 ATACCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATAGTGTCTGATGACTCAACC 590947 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | ||| || ||||| |||||||| Sbjct 590948 TCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| || | ||| || ||||| ||||||||||| Sbjct 591026 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCG 591085 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||| || ||||||||||| || |||||||| || ||||| Sbjct 591086 GCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTC 591129 >seq597 Length=589508 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || || || || || | ||||||||| | || | || |||||| | || Sbjct 283460 TTGACGACTTGGAATTCCCCAGCAAGCACACGACGAGAGTAGATATTTGACGTGTATGGC 283401 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| || || ||||||| || | || || ||||| || || Sbjct 283400 TCGAAGCACTCGTTGAAACCGAGAATTTGAGATGTGGAAGCAGTTGGCATAGGAGCAACA 283341 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | ||| ||||| | |||||||||||||| || |||| |||| |||| ||||| Sbjct 283340 AGAAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGCCTTGAGCGAGTCCCAGTCCCAG 283281 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283 || || || | |||| ||||||||||||||| | ||| |||| Sbjct 283280 AGATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAGAATACCCT 283235 >seq265 Length=369171 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | |||||||||||| || |||||||| || Sbjct 48738 CCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAT 48797 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 48798 AGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 48857 Query 131128 ATTCCTTCTTTGTC 131141 |||||||| ||||| Sbjct 48858 ATTCCTTCCTTGTC 48871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006663833600