Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq110 136 8e-27 seq153 89.7 1e-12 >seq110 Length=125662 Score = 136 bits (150), Expect = 8e-27 Identities = 316/476 (66%), Gaps = 3/476 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || |||| ||| || | ||||| || ||||||||||||||||||||| | Sbjct 62308 TCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTCCATGAAGTCGAAGGGGTTGACG 62367 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| |||| || |||||| || | |||| || || || |||||||| | Sbjct 62368 GCGTTGTAAACCTTGACATTGCCAAGCGCAAGCAAGAGACGATCAGCAACAAACTCGATG 62427 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || |||||||||||| | || | || || | ||| || | | | Sbjct 62428 TACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCACGGTAATGCTTCGCTCAAG 62487 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 ||||||| || | |||||||| | || || || | | | || || Sbjct 62488 AATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGGCGCGGACGGCTTCAGGCGAAGGC 62547 Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862 || || | |||| |||| | ||||| | |||| | ||||| |||||||||||| Sbjct 62548 TTCTTGTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGA 62607 Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922 ||| | |||||||| | || ||| ||||| | || || ||| ||||||||||| Sbjct 62608 GAGATAAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAG 62667 Query 251923 ATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGC 251982 || | ||||| || ||| | | |||||||||| | |||| || || ||| Sbjct 62668 ATAGATGCAAAGGCGCCGCTGAAGAAGATACCCTCGACAGCTGCGAATGCGACGAGACGC 62727 Query 251983 TCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT 252035 ||||| || ||||| | | | ||||| ||||||| | |||||||| Sbjct 62728 GATGCAAAGGTAGAGTTGTCATCGCAAATCCACTTCAGTGCCCAGTCGGCCTTCTT 62783 >seq153 Length=691363 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || ||||| || || |||||||| |||||||| || ||| |||| || || | ||| Sbjct 529237 GTTGGCTCTCTCTCTGGAGGTTGGAAAATGAAGCTTGCGCTCGCTCGTGCTATGTTGCTG 529178 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGA 279799 ||||||||||| || |||| || ||||| ||||| ||| |||| Sbjct 529177 CGTGCCGATGTGCTCTTGCTCGACGAGCCTACCAATCACTTGGA 529134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027823104074640