Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17]
1,040 sequences; 62,487,368 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq110 136 8e-27
seq153 89.7 1e-12
>seq110
Length=125662
Score = 136 bits (150), Expect = 8e-27
Identities = 316/476 (66%), Gaps = 3/476 (1%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
||||| || |||| ||| || | ||||| || ||||||||||||||||||||| |
Sbjct 62308 TCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTCCATGAAGTCGAAGGGGTTGACG 62367
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| |||| || |||||| || | |||| || || || |||||||| |
Sbjct 62368 GCGTTGTAAACCTTGACATTGCCAAGCGCAAGCAAGAGACGATCAGCAACAAACTCGATG 62427
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || |||||||||||| | || | || || | ||| || | | |
Sbjct 62428 TACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCACGGTAATGCTTCGCTCAAG 62487
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802
||||||| || | |||||||| | || || || | | | || ||
Sbjct 62488 AATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGGCGCGGACGGCTTCAGGCGAAGGC 62547
Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862
|| || | |||| |||| | ||||| | |||| | ||||| ||||||||||||
Sbjct 62548 TTCTTGTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGA 62607
Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922
||| | |||||||| | || ||| ||||| | || || ||| |||||||||||
Sbjct 62608 GAGATAAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAG 62667
Query 251923 ATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGC 251982
|| | ||||| || ||| | | |||||||||| | |||| || || |||
Sbjct 62668 ATAGATGCAAAGGCGCCGCTGAAGAAGATACCCTCGACAGCTGCGAATGCGACGAGACGC 62727
Query 251983 TCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT 252035
||||| || ||||| | | | ||||| ||||||| | ||||||||
Sbjct 62728 GATGCAAAGGTAGAGTTGTCATCGCAAATCCACTTCAGTGCCCAGTCGGCCTTCTT 62783
>seq153
Length=691363
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || ||||| || || |||||||| |||||||| || ||| |||| || || | |||
Sbjct 529237 GTTGGCTCTCTCTCTGGAGGTTGGAAAATGAAGCTTGCGCTCGCTCGTGCTATGTTGCTG 529178
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGA 279799
||||||||||| || |||| || ||||| ||||| ||| ||||
Sbjct 529177 CGTGCCGATGTGCTCTTGCTCGACGAGCCTACCAATCACTTGGA 529134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027823104074640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |