Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq264 89.7 4e-13 seq520 86.0 5e-12 >seq264 Length=644297 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || ||||| || || |||||||| ||| Sbjct 590765 ATACCACCGCGGAGACGTAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCG 590824 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||||||||| || || ||| |||| | ||||| ||||| || Sbjct 590825 GACAAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGT 590884 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || || || ||||| ||| || || ||| | | || | ||||| | || || Sbjct 590885 GGGATACCCTCCTTGTCCTGGATC-TTGGTCTTAACATTGTCGATAGTGTCTGATGACTC 590943 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| |||| ||| || || || |||||||| Sbjct 590944 AACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 >seq520 Length=276588 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| |||||||| ||||||| ||||| ||| || | ||| || ||||| |||| Sbjct 100395 TTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGCTTTCCAGCAAAGATT 100454 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | ||||||||||| || ||||| || || ||||| ||||| || | | || Sbjct 100455 AATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCG 100514 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | ||||| | ||| ||||| || | ||| | || ||||| || || ||||| || ||| Sbjct 100515 ATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTTTTGACGAAA 100574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129074796480