Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq110 228 2e-54 seq597 147 4e-30 >seq110 Length=125662 Score = 228 bits (252), Expect = 2e-54 Identities = 374/524 (71%), Gaps = 25/524 (5%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATC-GAGAGTCCCGACGCAAC 42691 ||||||||| |||||||| |||||||| || || ||||| | || | | || | || Sbjct 62795 CCCTGCATCCGCAAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGA-TGACAACTCTAC 62737 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | || |||||||| ||||||||| |||||||| Sbjct 62736 CTTTGCATCGCGTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT 62677 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || ||||||||||||||| || ||| || |||||||| | |||||||| |||| Sbjct 62676 TGCATCTATCTTCTGGCTCAAGAAGCGCGGTCTC-ATGCCCGGCTTGACCTTCTCCAACG 62618 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||| ||| | |||||||| |||| | ||||||||||||||||| ||||| | Sbjct 62617 AACTTATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTC---AC 62561 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| | ||||| ||| || ||||| ||||||||||| ||||| || | | Sbjct 62560 AGCTCAACAAGAAGCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAA 62501 Query 42931 TCGAGAAGGAGTTCCTCA-CGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGA 42988 | ||| |||| ||| | | || || | ||||| || ||||||||||| Sbjct 62500 TTGAGCAGGAATTCTTGAGCGAAG--CATTACCGTGCAGATTGCTCGGCATGAACTCTAC 62443 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGG---T 43043 |||||||||| |||||||| ||| || || || | |||| || ||| | | || | Sbjct 62442 CCTCATGTGCCAGTACATCGAGTTTGTTGCTGATCGTCTCTTGCTTGC--GCTTGGCAAT 62385 Query 43044 CTCAGCCGCCTCTACAACACGCCGT--GCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101 ||| | |||| ||||||| |||||||||||| ||||||||||| || | | Sbjct 62384 GTCA---AGGTTTACA--ACGCCGTCAACCCCTTCGACTTCATGGAGAACATATCTCTTG 62330 Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 || ||||| |||||||||||||||||||||| || |||||| Sbjct 62329 CCGGAAAGACTAACTTTTTCGAGAAGCGCGTCGGTGATTACCAG 62286 >seq597 Length=589508 Score = 147 bits (162), Expect = 4e-30 Identities = 389/589 (66%), Gaps = 14/589 (2%) Strand=Plus/Minus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCA 244974 ||| || || ||||||||| || ||| ||| | || || |||||| ||||| Sbjct 282608 GTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCA 282549 Query 244975 CATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAG 245034 ||||||| |||| ||||| | | ||| | || |||||| |||||||| ||||| | Sbjct 282548 CATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAA 282489 Query 245035 GGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAA 245094 ||| | ||| || || | | | | || || ||| |||||| ||||| || || Sbjct 282488 GGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAA 282429 Query 245095 AAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTT 245154 ||| ||||| ||| ||||||| ||||| | ||||| |||| || || || ||||| Sbjct 282428 CCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTT 282369 Query 245155 GTTGCCTCCCTGGTCCACCATCCTCTCGAG----CGCGTTGAAGATGCGCAGGGTAGGCA 245210 |||||| || || | || | | |||| ||||| |||| || || |||| | Sbjct 282368 GTTGCCACCTTG----ATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAA 282313 Query 245211 CTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGC 245270 | | ||||| || |||||| || || ||||| | || || | | || | | Sbjct 282312 CAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATG-CGA 282254 Query 245271 TG-ATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTG 245329 || ||| | ||| | || || ||| ||| || || | || || |||||| |||| Sbjct 282253 TGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTG 282194 Query 245330 TCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGG 245389 || || ||||| || |||||| |||| ||| | || ||||| || || || || Sbjct 282193 TCGTAGATACCCTCGATACTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGC 282134 Query 245390 GGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAG 245449 || | || ||| | |||||| || |||||| |||||| || ||||| | | || Sbjct 282133 GGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGGGGAGGCGTGCGTGAAGTATTTGTTAGAC 282074 Query 245450 AGGAACCCGTACGTCTG--GAGCAGAGCGTCGATGTTGTCGCCGTGGAT 245496 | | | ||||||||| |||||| || |||| || ||||| || Sbjct 282073 ATGTAGTTGTACGTCTGAATAGCAGA--TTCAATGTCCTCTCCGTGAAT 282027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944326923590400