Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq597 154 1e-32 >seq597 Length=589508 Score = 154 bits (170), Expect = 1e-32 Identities = 434/662 (66%), Gaps = 6/662 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||||| |||||| || |||||| || ||||| ||| || ||| Sbjct 281919 AATTACCAATACTTTGGCTTCAAGACCCTGGAGCGATCATACCTACTCCGAATAAGCGGC 281978 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || || | ||||| || || |||| |||||||| | Sbjct 281979 AAGGTCGCTGAGCGTCCACAACATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAG 282038 Query 93835 GACATGCCGAATGT--TTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGG 93892 ||||| |||| | | | | | | | || ||||| |||| | || | Sbjct 282039 GACATT--GAATCTGCTATTCAGACGTACAACTACATGTCTAACAAATACTTCACGCACG 282096 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || |||| || || |||||||| || || || || || | || || || ||||| | Sbjct 282097 CCTCCCCCACACTTTTCAACGCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCA 282156 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| | |||| ||| ||| || || | ||||| ||||||| ||||| | Sbjct 282157 TTGAC-ACGAAGGAGGACAGTATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATG 282215 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || ||||| ||| || || ||||| | | | || | | || |||| || || Sbjct 282216 ATTTCAAAGACCGCTGGTGGTATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCA 282275 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| | || || || ||||| || ||||| || || ||||||||||| ||||| || Sbjct 282276 TACATTGGAGGAACAAACGGCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGAC 282335 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | || |||||||| || || ||||| | | | ||| | ||||| |||| Sbjct 282336 GCGACTGCTCGCTACGTTGATCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTAC 282395 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 |||||||| |||||||| || || | | || ||| |||||||||||||||| Sbjct 282396 CTCGAGCCATGGCACGCCGATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAA 282455 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | | || | || || ||||| || | ||| | || ||||| || ||||| Sbjct 282456 GAAGAAGCGCGTGCTCGTGATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAG 282515 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 |||||||| | || || ||||| ||| | || || | || || || || || || Sbjct 282516 CGCGTCGAACAGAATGGCGACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCC 282575 Query 94372 GA 94373 || Sbjct 282576 GA 282577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494716768598400