Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq597 82.4 7e-11 >seq597 Length=589508 Score = 82.4 bits (90), Expect = 7e-11 Identities = 227/346 (66%), Gaps = 8/346 (2%) Strand=Plus/Plus Query 123974 CGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGC 124033 ||| |||||| |||||| | ||||| ||| || ||||| | | ||| ||| | Sbjct 283113 CGAGGCAAAGAAGCTTAACATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTC 283172 Query 124034 GAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAG 124093 |||| | ||||| || | ||| | ||| ||| |||| |||| || | Sbjct 283173 TTCCTGCAAGCTTGCACAAGAAGAAGGCACATACAAAACCTACGAGGGCTCTCCAGTTTC 283232 Query 124094 CCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAG 124153 || |||||| | ||||||||||||||||| | || || || || | ||||||||| Sbjct 283233 CCAGGGTATTCTCCAGTACGACATGTGGAACGTCACTCCTACGGATCTCTGGGACTGGGA 283292 Query 124154 CGTTTTAAAACAACGC--ATATC--GACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGT 124209 | | ||| || ||||| || ||||||| | || ||||| || | || || Sbjct 283293 C----TCGCTCAAGGCTGATATCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTC 283348 Query 124210 ACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCA 124269 ||||| || || |||| |||||||| | || |||||| | ||||||||| | || Sbjct 283349 CTATGCCAACTGCTTCCACATCTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACA 283408 Query 124270 CTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 | ||| | ||| || || ||| | || || || || ||||| Sbjct 283409 CGTCAAATATCTACTCTCGTCGTGTGCTTGCTGGGGAATTCCAAGT 283454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997323958400