Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq264 150 4e-31 seq265 113 1e-19 >seq264 Length=644297 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||||||||||| |||| ||||||||| ||| || Sbjct 590546 CGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTA 590605 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| ||||||||||||||||||||| |||||||| || ||| ||| ||| Sbjct 590606 CGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCT 590665 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | ||| || || | Sbjct 590666 TCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGT 590725 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || ||||| || ||||| Sbjct 590726 GTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTG 590763 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||||||| || ||||| |||| ||||||||| | ||| || | |||||| Sbjct 590783 AGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCT 590842 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| | ||||||||||| || || || || ||| Sbjct 590843 TCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCC 590902 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||||| || || || ||||| ||||| ||| Sbjct 590903 TGGATCTTGGTCTTAACATTGTCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTC 590962 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | ||| || || || || || Sbjct 590963 TTGCCCGTCAAAGTCTTGACGAAGATCTG 590991 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 591011 AGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCC 591070 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| | ||||||||||| || ||||| || || Sbjct 591071 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT 591130 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || || | ||||||||| Sbjct 591131 TGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTC 591190 Query 199598 TTACCCGT 199605 || || || Sbjct 591191 TTTCCGGT 591198 Score = 84.2 bits (92), Expect = 5e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||||||||||||||| | || ||| ||| |||||| ||||| Sbjct 590640 CTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACGTTGAGCGACTACAACATCCAG 590581 Query 200995 AAAGAGTCTAC 201005 || ||||| || Sbjct 590580 AAGGAGTCGAC 590570 >seq265 Length=369171 Score = 113 bits (124), Expect = 1e-19 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| ||||| |||||||| ||||||||||| |||| ||||||||| | | || Sbjct 48744 CGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTG 48803 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||||| ||||||||||| | ||||||||||| || |||||| Sbjct 48804 CGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCT 48863 Query 199529 TC 199530 || Sbjct 48864 TC 48865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178905890869680