Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq264 129 7e-25 seq265 102 9e-17 >seq264 Length=644297 Score = 129 bits (142), Expect = 7e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| | ||||| | || || || |||||||||||||| Sbjct 590804 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAG 590863 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | || | | |||||||||| |||||| |||| | | Sbjct 590864 ATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTTAACATTG 590923 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || || || |||| |||||||| |||||||||| || || || Sbjct 590924 TCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACG 590983 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 590984 AAGATCTGCAT 590994 Score = 116 bits (128), Expect = 4e-21 Identities = 130/171 (76%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || | || |||||||||||||||||||| Sbjct 591031 CTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAA 591090 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | || | | ||||||||| ||||| |||||| ||| Sbjct 591091 GATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGT 591149 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | |||||||| || || || || | ||||| || || || |||| Sbjct 591150 TGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 591200 Score = 111 bits (122), Expect = 2e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| ||||| || | | ||| | ||||| ||||| || |||||| ||||| ||||| Sbjct 590533 TTAGTTGCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTA 590592 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||| | || || | || || | |||||| |||||||| || | ||||||||| || Sbjct 590593 GTCGCTCAACGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATC 590652 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCG 46538 | || | | ||||||||| ||||||| |||||| ||| | | | ||||| | Sbjct 590653 TGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTGA-CGTTGTCGATGGTGTCAGAGG 590711 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || | || || || ||||| || || || || || ||||||||||| Sbjct 590712 ATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 590766 >seq265 Length=369171 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| ||||| ||||| | || |||||||||||||||||||| Sbjct 48773 CTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAA 48832 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||||||||||||||| | || | | |||||||| Sbjct 48833 GATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTC 48871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231051900800