Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq264 84.2 2e-11 >seq264 Length=644297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || ||||| || | |||| ||| || || || || || |||| | Sbjct 590768 CCACCGCGGAGACGTAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 590827 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || | ||| || ||| | || || || |||||||| || | || Sbjct 590828 AAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 590887 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | || || ||||| || || |||| | |||| || ||||||| || | Sbjct 590888 ATACCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATA--GTGTCTGATGACTCAA 590945 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | ||||| || || || || ||||| ||||| || |||||||||||||| Sbjct 590946 CCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347365197090320