Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq264 260 2e-64 seq86 127 3e-24 seq1 111 2e-19 seq597 109 7e-19 >seq264 Length=644297 Score = 260 bits (288), Expect = 2e-64 Identities = 483/701 (69%), Gaps = 16/701 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| |||||||| |||||||| || || || || || | ||||| || || ||||| Sbjct 635896 TCGAAGTCTTCACCGCCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAAATACCC 635837 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | || | || ||||| || || || ||||| || || || || || ||| Sbjct 635836 TCCTCAATGGTCAAAAGAGACACATCGAAGGTTCCTCCACCGAGATCGAAGATAAGGACG 635777 Query 7577 TTCGTATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || || | ||| ||| |||||||| || ||||| || || || || || Sbjct 635776 TTGCGCTCACCAGTGGCCTT----CTTGTCGAGACCATAAGCGATGGCAGCGGCTGTGGG 635721 Query 7633 TTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 ||| || || |||||||| ||| || ||||||||||| | || || || || |||| Sbjct 635720 TTCGTTGATGATACGAAGGACA-TTGAGGCCAGCAATGAGACCGGCGTCCTTTGTGGCTT 635662 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| ||||| ||||| ||||| || ||||| || ||||| |||| |||| | | Sbjct 635661 GTCGCTGCGAGTCGTTGAAGTATGCTGGGACTGTGACGACGGCGTTGTTGACGGTACCTC 635602 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 |||| || ||||| ||| | || ||| ||||| | | ||| || || ||||| || | Sbjct 635601 CGAGGTATGATTCAGCGGTCTCGCGCATCTTGGTCAAGATCATGGAGGAGATCTCCTCTG 635542 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC 7871 | || || || || || || || |||| | | | || || ||| ||| Sbjct 635541 GTGTGAAAGTCTTGGTCTCGCCCTTGAACTCAATCTGGACAACAGGCTT-GCCG-AGC-T 635485 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 | || | ||| | | | | |||||||| | ||||||| || | ||||| Sbjct 635484 TGTCGACGATCTTGAAGGGGAAGTGCTTCATATCAGCCTGGACCTCAGCATCGGCAAACT 635425 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | || || || ||||| ||||| || || ||||| |||||||||||| |||| Sbjct 635424 TGCGACCTATGAGGCGCTTGGCATCGAAGACAGTGTTGACGGGGTTCATGGCGACCTGGT 635365 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 ||||||||| ||| || || |||||||| || || || || || ||| | ||||| | Sbjct 635364 TCTTCGCCGAGTCACCAATGAGACGTTCCGTA---TCTGTGAAGGCAACGAAGGATGGTG 635308 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | || || || || |||||||||||||| ||||| | ||||| | | | | || | Sbjct 635307 TTGTGCGGTTACCCTGGTCGTTCGCAATGATTTCGATACGGTCATCTCTGAAAATACCCA 635248 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 |||| || ||||| || || ||||| |||||||| ||| || Sbjct 635247 CGCAGGAGTACGTGGTACCCAAATCGATACCGATAGCTGGA 635207 >seq86 Length=145806 Score = 127 bits (140), Expect = 3e-24 Identities = 347/522 (66%), Gaps = 17/522 (3%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || || || ||||| |||||||| |||| | | || || |||||||| | | || Sbjct 15642 AGGTCTTCGAAACGGGCACGGGTGATGGTGGCAGTAAAGTCCTCGCCGTCGAAGAGGGAG 15701 Query 7304 TCAATTTCAATGGTTGTT--TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 || || || | ||| || || | || | || || || ||||| || || || || | Sbjct 15702 TCGATCTCGACGGTGGTGGATGAGGCGCTG--GACAAAGTACGCTTGGCACGTTCGCAAG 15759 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || ||||| | ||| || ||||| | || ||| || || || ||||| || || Sbjct 15760 CGGTACGTAACCTACGGAGAGCACGGGCGTCACCAGAGATGTCCTTCTTGGTCTTTCGCG 15819 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 ||||||| |||||| |||| ||| | | |||||||| | ||||||||||||| Sbjct 15820 AGAACTCTTTCTTGAAGTGGTCGAGCAAGT-TGGTGTCGAAATCCTGACCACCCAAGTGT 15878 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || || || ||||| |||| ||| || | |||| | | || ||| Sbjct 15879 GTGTCACCAGCTGTGGCCTTGACAGTGAAGACACCGCCCTGGATGTGGAGAAGGGAGACA 15938 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || || || ||||| || || | || | || || | | | ||| | |||| Sbjct 15939 TCGAAAGTTCCTCCACCGAGATCGTAGATCAACACATT--TCGCTCCTTCTCAG-ACTTA 15995 Query 7601 ------TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653 |||||||||| ||||| || || || || || || || || |||| || |||| Sbjct 15996 CCGGAGCCGAGACCGTAGGCGATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACA 16055 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || || | || | | ||||| || |||||||| || || ||||| || || Sbjct 16056 -TTGAGTCCGGAGATGGAACCGGCATCCTTGGTCGCTTGACGCTGATTGTCGTTGAAATA 16114 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| || ||||| || | | || ||||| ||||| Sbjct 16115 AGCTGGGACGGTGACGACAGCCTTCTCAACCTTCTTTCCGAG 16156 >seq1 Length=1051074 Score = 111 bits (122), Expect = 2e-19 Identities = 241/358 (67%), Gaps = 6/358 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || ||||||| ||| Sbjct 336111 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGAGAGAACCTCAAAGACACCA 336170 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || | | | | |||||||| || || |||||||||| ||| | ||||| Sbjct 336171 GAGTCGACAGTGAGCGCGGAAACATCGAAGGTTCCACCACCCAAGTCGTACACAATGA-- 336228 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | || || || || | | ||| || |||||||| || | ||| || || ||||| Sbjct 336229 TCTGGCG-CTCCTCCTCGCTCTGCTTGTCAAGACCGTAAGCCAAAGCGGCTGCGGTTGGC 336287 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | || ||| ||| ||| || || || || || | || || || || || Sbjct 336288 TCGTTGACAACACGGAGAACGTTAAGACCGGCGATGGTACCAGCGTCCTTGGTGGCGGCA 336347 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 ||||| ||||| |||||||| ||||| ||||| || |||| ||| || | || Sbjct 336348 CGTTGGTTGTCGTTGAAGTAGGCGGGGACGGTTACAACGGCGTTGACGACCTTTTGTCCC 336407 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || || || |||| || |||||||| |||||||| | || || || |||| Sbjct 336408 AAGTAGGACTCGGCGACTTCCTTCATTTTCTGGAGAACCATAGCGGAGATTTCCTCAG 336465 >seq597 Length=589508 Score = 109 bits (120), Expect = 7e-19 Identities = 339/522 (65%), Gaps = 17/522 (3%) Strand=Plus/Minus Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 || |||||||| ||| |||| ||||| | |||||| | || | |||||| || Sbjct 282616 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 282557 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | ||| || | | | ||| | |||| ||| ||||| |||||||||| || ||| Sbjct 282556 TGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGA 282497 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 ||||||| ||| | || || || ||| | ||| ||||| | || || ||| | Sbjct 282496 ATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTC 282437 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGC-AATAGACCC 105704 | || | | | || | ||||||||||||||| || | |||| || ||| ||| Sbjct 282436 AGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACC- 282378 Query 105705 TTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758 | ||||| || |||||| || || | || || | || | | || || | Sbjct 282377 ---AGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAG 282321 Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818 ||| |||| || ||| | ||||| || |||||||| | ||| | |||| | | || || Sbjct 282320 CATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCG 282261 Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTT---ACTGATACGCGCACACTC 105875 | || | || | || ||||| ||||| ||| | | ||| ||||| Sbjct 282260 GATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATA---GCACAAGT 282204 Query 105876 TTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGA 105935 || | || ||||| ||||| |||||||| || ||||| | |||| ||||| || || Sbjct 282203 CTTGAGGGTGTCGTAGATACCCTCGATACTGTCCTCCTTCGTGTCAATGAGGAAGCAAGA 282144 Query 105936 TGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977 || | ||| ||| ||||| || || ||||| || || || Sbjct 282143 CGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGG 282102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635124543273600