Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq597 116 4e-21 seq99 98.7 1e-15 >seq597 Length=589508 Score = 116 bits (128), Expect = 4e-21 Identities = 388/599 (65%), Gaps = 15/599 (3%) Strand=Plus/Minus Query 110545 CCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCC 110604 ||||| | ||| | |||||| || || || || | ||| | ||| | ||| | Sbjct 282586 CCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGTCCAGTCGCCATTC 282527 Query 110605 TCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAA 110664 | || || | ||||||||||||||| |||||||||| || ||||||| ||||| | Sbjct 282526 TGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAAGGCATAGAAAAGATCACGAGCA 282467 Query 110665 CGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGC 110724 || || ||||| | || ||||| | || || || ||| | || ||| | |||| Sbjct 282466 CGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGC 282407 Query 110725 CATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACA 110778 ||||| ||||| |||| |||| || | | |||| || | || | ||| Sbjct 282406 CATGGCTCGAGGTAGATGGCGA---ATGCACCAGGACGCTTGTTGCCACCTTGATCAACG 282350 Query 110779 TAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTT 110838 ||||| || || || | ||||| | ||||||||||| || || | ||| || ||| Sbjct 282349 TAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTT 282290 Query 110839 GTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCC 110898 || || | ||| || | |||| || ||| || || | | || |||||||| Sbjct 282289 GTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCA 282230 Query 110899 GCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATC 110957 || ||| ||| |||| | ||| |||| || | || ||||| || || || Sbjct 282229 GCGGTCTTTGAAATCATAGCACAAGTCT-TGAGGGTGTCGTAGATACCCTCGATACTGTC 282171 Query 110958 TGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAA 111017 |||| || |||| || |||||||| || | || || |||| || || || ||||| Sbjct 282170 CTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAA 282111 Query 111018 GAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGT 111075 ||||| || | || || ||| || ||| ||||| | |||||| || | | Sbjct 282110 AAGTGTGGGGGAGGCGTGCGTGA--AGTATTTGTTAGACATGTAGTTGTACGTCTGAATA 282053 Query 111076 GCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG 111134 || || | || | |||||||| || | || || ||||||| ||||| ||| || Sbjct 282052 GCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGATCATATGTTGTGG 281994 >seq99 Length=132720 Score = 98.7 bits (108), Expect = 1e-15 Identities = 210/314 (67%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742 ||||| | ||| |||||||| | ||| || || | || || | | |||||| Sbjct 24285 GCGTCCAACTCGTCGATGAAAATGATGGCAGGAGACTTTGTGCGAGCGTTTGTGAAAAGC 24344 Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACAC 11802 || || |||||||||||||| ||||| || ||||||| |||| | || ||||| Sbjct 24345 TCCCGAACACGCTTCGCTCCGACACCGACATACATCTCGTCGAATTCTGATCCAGAAGCA 24404 Query 11803 TGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTA 11862 | || ||| || ||| || || ||||||| |||| || || ||||| ||||| || Sbjct 24405 TAAAAGAACGGGACACCAGCTTCGCCAGCGACTGCTCTTGCCAGCAGAGTTTTACCAGTT 24464 Query 11863 CCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGC 11922 ||||||| ||| | || || | || ||| | |||| |||| | || | | Sbjct 24465 CCAGGTGGGCCAACAAGCAGAACACCTTTGGGAAGCTTGCCACCCAGTGTCGAGAATTGT 24524 Query 11923 TCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCC 11982 | || | || ||||| |||||| |||| | || |||||||| |||| ||| Sbjct 24525 TTGGGGTCTTTTAGGAACGCCACAAGTTCCTGCAACTCTTCCTTGGCCTCGTCGCAACCT 24584 Query 11983 TCAACATCGGTGAA 11996 || |||||| |||| Sbjct 24585 TCCACATCGCTGAA 24598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968343312000