Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq597 181 1e-40 seq110 93.3 5e-14 >seq597 Length=589508 Score = 181 bits (200), Expect = 1e-40 Identities = 418/627 (67%), Gaps = 11/627 (2%) Strand=Plus/Minus Query 106691 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 106750 ||||| |||||| ||||| ||||| ||||| |||| ||||| || || | Sbjct 282616 TACTTCTCGTAGAGAGCTTCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCG 282557 Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810 | || || | |||| ||| | ||| || || || ||||||||||| ||||| ||| Sbjct 282556 TGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGA 282497 Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 ||||||| || | || ||||| | | || || ||||| | || ||||| || Sbjct 282496 ATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTC 282437 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930 | || | | | | || ||| |||||||||||||| || |||| |||| || | Sbjct 282436 AGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGA---ATGCA 282380 Query 106931 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 ||||| ||| |||||| || ||||| || || |||| ||| || || ||| Sbjct 282379 CCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGC 282320 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || |||| || ||| | ||| || ||||| || | ||| ||| | |||||| Sbjct 282319 ATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGG 282260 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | ||| |||| | || ||||| ||||| |||||| || ||||| | | Sbjct 282259 ATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTG 282200 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 || || | |||||||| | ||| ||||||||| || | || ||||||||| || Sbjct 282199 AGGGTGTCGTAGATACCCTCGATACTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAG 282140 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 | |||||| ||||| || || ||||| || || || | ||||| |||| || | Sbjct 282139 AGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGGGGAGGCGTGCGTGAA-GTATTT 282081 Query 107225 -TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 | ||||| | || ||| |||| | |||| |||||||| || ||||| ||||||| Sbjct 282080 GTTAGACATGTAGTTGTACGTCTGAATAGCAGATTCAATGTCCTCTCCGTGAATGCCGAC 282021 Query 107284 GGCCACACGCATAAACATGTATTGGGG 107310 ||||||||||| | ||| | ||| || Sbjct 282020 TGCCACACGCATGATCATATGTTGTGG 281994 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 106455 TTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTA 106514 |||| | || || |||||||| ||||||||||| |||||| | | |||||| | Sbjct 282901 TTGGCAAAGCCATGGATGCCAAGTTGCAAACAGCGACCTCATCAGGCGCAGAGTACTCAA 282842 Query 106515 AAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTT 106574 || || || |||| ||||| || ||| || ||||| ||||| || || ||||| Sbjct 282841 TGATCTCAGTGCACAGATTGGAGCTACGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGC 282782 Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGA 106633 |||||| ||||| ||||| |||||| | || | || ||||| ||||| | |||| ||| Sbjct 282781 GGTTGCAAGCATCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCGGTCTG-GGCTTGAAGA 282723 Query 106634 ATTGCCTTCCA 106644 || || | ||| Sbjct 282722 ATGGCGTACCA 282712 >seq110 Length=125662 Score = 93.3 bits (102), Expect = 5e-14 Identities = 326/499 (65%), Gaps = 10/499 (2%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || || |||||||| || ||||| ||||| || |||| ||||| ||||| Sbjct 62290 TAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTCCATG 62349 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTG-AGGAGACG 117104 ||||| || || || ||||| ||| || || | | | | | |||||| Sbjct 62350 AAGTCGAAGGGGTTGACGGCGTTGTAAACCT-TGACATTGCCAAGCGCAAGCAAGAGACG 62408 Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164 ||| | ||| |||| ||||||| | |||| ||||||||| |||| | | || Sbjct 62409 ATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCA 62468 Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224 || | ||| || | ||| | | |||||| | || ||||| | | ||||||| | Sbjct 62469 CGGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGGCGCG 62528 Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA--AGAGCTCCACGGCAAACTCC 117282 || | ||| | | || | || | || ||| |||| |||||| || Sbjct 62529 GACGGCTTCAGGCGAAGGCTTCTT--GTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCG 62586 Query 117283 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGA 117342 ||| | ||||| || || || |||||||| || |||||| | ||| ||||||||| Sbjct 62587 GTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGA 62646 Query 117343 CCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 || |||||||| | ||| | |||| ||| || | ||| ||||||||||||||| || Sbjct 62647 CCGCGCTTCTTGAGCCAGAAGATAGATGCA-AAGGCGCCGCTGAAGAAGATACCCTCGAC 62705 Query 117402 ACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCATTTCA 117460 | || || || | || ||| || |||| ||| | | |||| ||| |||| Sbjct 62706 AGCTGCGAATGCGACGAGACGCGATGCAAAGG-TAGAGTTGTCATCGCAAATCCACTTCA 62764 Query 117461 TTGCCCATTTCGCCTTCTT 117479 |||||| | |||||||| Sbjct 62765 GTGCCCAGTCGGCCTTCTT 62783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973130249600