Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17]
1,040 sequences; 62,487,368 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq264 140 7e-28
seq520 104 5e-17
seq265 89.7 1e-12
>seq264
Length=644297
Score = 140 bits (154), Expect = 7e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| || | || |||| ||||| |||
Sbjct 591014 ACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCCTCG 591073
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | || || |||||||| || || || || |||||||||
Sbjct 591074 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGA 591133
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| | || || |||||||| | |||||||
Sbjct 591134 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTT 591193
Query 195112 CCTGTCA 195118
|| ||||
Sbjct 591194 CCGGTCA 591200
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| ||||| || || || ||||| ||| | || | |||||||| | |||||| ||
Sbjct 590570 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCATCTTCCAACTGCTTTCCG 590629
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|||||||| || || || || ||||||||||| ||||| ||||| || || || ||||
Sbjct 590630 GCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGATCTTCGTCTTG 590689
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
||||| || |||||||| || ||| ||||| || |||| ||||| || || | ||
Sbjct 590690 ACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCCGGTGAGGGTC 590749
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 590750 TTCACGAAGATTTGCAT 590766
>seq520
Length=276588
Score = 104 bits (114), Expect = 5e-17
Identities = 143/196 (73%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995
||||| ||| | | | ||||| || ||||| ||| |||| || | ||||| || | |
Sbjct 100380 GTGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAG-GTACGTCCATCCTCCAATT 100437
Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055
|||| || || ||||| | ||| ||||||||||| ||||| || || |||||||| || |
Sbjct 100438 GCTTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCT 100497
Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115
| |||||| || || || ||||| || || || |||||||| | ||||| || |
Sbjct 100498 TGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCG 100557
Query 195116 TCAAAGTTTTTACGAA 195131
| | ||||| |||||
Sbjct 100558 TGAGGGTTTTGACGAA 100573
>seq265
Length=369171
Score = 89.7 bits (98), Expect = 1e-12
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| || | || || | |||||||||
Sbjct 48756 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGTCCATCTTCG 48815
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| | || || |||||||| || || ||||| ||||||
Sbjct 48816 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCT 48872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109466816157680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |