Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq176 98.7 8e-16 >seq176 Length=404529 Score = 98.7 bits (108), Expect = 8e-16 Identities = 261/396 (66%), Gaps = 2/396 (1%) Strand=Plus/Plus Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 ||||| |||||| | ||||||| || || || ||||| ||||||| || Sbjct 205123 ACGTAGAACTGAGCAAACATGTGGCAAGGGGGGAGGGCCATTTTCGTCAAGTCTGCAGGA 205182 Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108 ||||| || | || |||||| || | || | || |||||| | | ||||| | | Sbjct 205183 TTCCATGCACTCAAGATGATTCGGCGATCGTAAGGCTTGTTCTTCAGTTTGTCCATGATG 205242 Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30168 | | ||| |||||||| || || | || |||| ||| ||| ||||| ||| Sbjct 205243 TCTGCCAGTTGATCCACGCCTTGACCGGTATAATCTGTCCTTGCATCCACATACTCGGCT 205302 Query 30169 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30228 || ||||| | ||| ||||||||||| |||||||| ||||| || ||||| | ||| | Sbjct 205303 CCAAAATGTCGCCATTGGAACCCGTAGACCGGTCCAAGGTCACCTTCTTCACGGTG-GCT 205361 Query 30229 AAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30287 || || | |||| | | | || | | ||||| |||||||||| || | |||| Sbjct 205362 TAGACCGACGCTGTCGAGATATTCGCGGCTGCCGTTTCCGTCCCAGATTTTGATGCCCTG 205421 Query 30288 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30347 || || || ||| || ||| | ||| |||||||| || || || | | || Sbjct 205422 GTCCGAAAGTGGTTTCGAAGACGTGCATCCTGCAACGAACCAGAGTAGTTCAGCAATTAC 205481 Query 30348 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 || | ||||| ||||| || ||||| || || Sbjct 205482 AGCACGTAAGAAGACTCTCTTTGTGGTGAGAAGTGG 205517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408612420771920