Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq264 100 2e-15 seq520 87.8 1e-11 seq376 86.0 4e-11 >seq264 Length=644297 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | |||||||| || || || || || || ||||| |||||||| |||||||| Sbjct 590611 ATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTT 590670 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||||| || || || |||| | | | ||| || ||||| Sbjct 590671 GTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAAT 590730 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || |||||||| ||||| ||||| ||||| Sbjct 590731 AGTCTTGCCGGTGAGGGTCTTCACGAAGATTTG 590763 >seq520 Length=276588 Score = 87.8 bits (96), Expect = 1e-11 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || | ||||||||||||||| || | || ||||| || || |||||||| ||||| Sbjct 100427 ATCCTCCAATTGCTTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTT 100486 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| |||||| || ||||| |||| | |||||||| || Sbjct 100487 GTCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGAT 100546 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAA 480764 || || || ||||| || || |||||| Sbjct 100547 GGTCTTGCCCGTGAGGGTTTTGACGAAA 100574 >seq376 Length=315369 Score = 86.0 bits (94), Expect = 4e-11 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 || |||||| |||| || | | || || | || || || || || || || ||||| Sbjct 206770 TACCTTGGAAAAGATGTCAAGAACGCCGTCGTCACCGTCCCCGCCTACTTCAACGATTCC 206711 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 || ||||||||||| || ||||| || || | ||||||||||| | || |||| Sbjct 206710 CAGCGTCAAGCAACAAAGGATGCCGGTGCCATCTCCGGTCTTAATGTCCTTCGGGTTATC 206651 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 || || ||||| || || ||||| ||||| ||||| || ||| Sbjct 206650 AACGAGCCAACTGCTGCTGCACTCGCTTACGGTCTAGACAAG 206609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268134589353920