Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq597 176 5e-39 seq110 93.3 5e-14 >seq597 Length=589508 Score = 176 bits (194), Expect = 5e-39 Identities = 419/627 (67%), Gaps = 11/627 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| ||||||| || ||| ||||||| ||||| || |||||||| |||| Sbjct 281994 CCACAACATATGATCATGCGTGTGGCAGTCGGCATTCACGGAGAGGACATTGAATCTGCT 282053 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | |||| ||| || | ||||| | | || |||| ||||| | || || || || Sbjct 282054 ATTCAGACGTACAACTACATGTCTAACAAATAC-TTCACGCACGCCTCCCCCACACTTTT 282112 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || ||||| |||||| | || ||||||||| || | || |||||||| Sbjct 282113 CAACGCAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGA 282172 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | |||||||| | || || | | ||||| || |||||| ||||| Sbjct 282173 CAGTATCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGG 282232 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | |||| ||| | |||||| | ||| ||| | || ||||| Sbjct 282233 TGGTATCGGCCTTAACATACATCGCATCCGAGCCACTGGATCATACATTGGAGGAACAAA 282292 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || ||| | ||| || |||| ||||| || || ||| |||| || || ||||| || Sbjct 282293 CGGCACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGT 282352 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGCA 75624 |||||| | ||| | ||| | || ||| ||| ||||| | || |||||||| Sbjct 282353 TGATCAAG-GTGGCAAC--AAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCA 282409 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 |||||| || | | | | || | || ||||| || | ||||| || || Sbjct 282410 CGCCGATGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCGTGC 282469 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | ||||| || | || |||||||||| ||||| ||||||||||| || || || Sbjct 282470 TCGTGATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAA 282529 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| |||| | || || || || || ||||| |||| ||||| Sbjct 282530 TGGCGACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGA 282589 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTA 75831 ||||| ||||| |||||| ||||| Sbjct 282590 CGAGTTCGAAGCTCTCTACGAGAAGTA 282616 Score = 136 bits (150), Expect = 5e-27 Identities = 682/1072 (64%), Gaps = 16/1072 (1%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || ||||| || | ||||| |||||||| | || | ||||||||||| ||| Sbjct 282712 TGGTACGCCATTCTTCAAGCCCAGACCGAGACTGGCAACCCTTTCATGCTTTACAAAGAT 282771 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||| ||| ||||| || || ||||| |||||||| || ||||| ||||| ||| Sbjct 282772 GCTTGCAACCGCAAGAGCAATCAGAAGAACTTGGGAACCATTCGTAGCTCCAATCTGTGC 282831 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | |||||| | | |||||| ||||||||||| |||||||| || Sbjct 282832 ACTGAGATCATTGAGTACTCTGCGCCTGATGAGGTCGCTGTTTGCAACTTGGCATCCATG 282891 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTC-GCACTTTTGATTATGAAAAACTT-CATG 76115 || | |||| | || | | | || | || | ||||| | || || || || | Sbjct 282892 GCTTTGCCAACCTTCGTTGACGTTCA-ACGCGGCGTCTATGATT-TCAACAAGTTGCACG 282949 Query 76116 AAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCG 76175 || || | | ||| | || | ||| |||||||| || || |||| Sbjct 282950 AAGTCGTCCAAACTGTCATTCGCAACTTGAACAAGATCATTGACGTCAACCACTACCCCG 283009 Query 76176 TTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTC 76235 || || || || || ||| | || | ||| | ||||| || |||| Sbjct 283010 TTCCCGAAGCATACAACAGCAACTCCCGTCACCGTCCCGTCGGTGTTGGTGTACAGGGTC 283069 Query 76236 TCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATG 76294 | ||||||| || || | | | || | | || || || || || ||| || | Sbjct 283070 TTGCGGATGCTTTCCTTGCTCTTCGCCTGC-CCTTCGAGTCTCCCGAGGCAAAGAAGCTT 283128 Query 76295 AATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCT 76354 || || ||||| || ||||| || || || || || | || | | || Sbjct 283129 AACATTCAAATCTTCGAGACCATTTACCATGCCGCCTTGACCTCTTCCTGCAAGCTTGCA 283188 Query 76355 GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAG 76414 ||| |||| | || | || | ||||| ||||| | ||||| || | || ||| Sbjct 283189 CAAGAAGAAGGCACATACAAAACCTACGAGGGCTCTCCAGTTTCCCAGGGTATTCTCCAG 283248 Query 76415 TTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAAC 76472 | || |||| |||| || | || | | || || |||||||| ||||||| Sbjct 283249 TACGACATGT-GGAACGTCACTCCTACGGATC-TCTGGGACTGGGACTCGCTCAAGGCTG 283306 Query 76473 GCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCA 76532 |||||| || | ||| |||| ||| ||| | | || || |||||||| || |||| Sbjct 283307 ATATCAAGAAGCACGGTATTCGCAACTCACTTCTTGTTGCTCCTATGCCAACTGCTTCCA 283366 Query 76533 CCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGA 76592 | | ||||| | ||| || || ||||| || |||||||| |||| |||||| Sbjct 283367 CATCTCAAATTCTCGGTTTCAACGAGTGCTTCGAGCCATACACGTCAAATATCTACTCTC 283426 Query 76593 GAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGA 76652 | | || || || || || | |||||| || |||| || ||| Sbjct 283427 GTCGTGTGCTTGCTGGGGAATTCCAAGTCGTCAACCCATGGCTGCTCAAAGATCTCGTCG 283486 Query 76653 AGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTC 76712 |||| ||||| ||||| | | |||||| ||| || | || ||||||||| || | Sbjct 283487 AGATGGGTCTTTGGTCGGACAACATGAAGAATCGTATCATTGCAGAGGGTGGTTCTATCC 283546 Query 76713 AAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCA 76772 | || || | |||| || || ||||||||| || ||| || || |||||||||| Sbjct 283547 AGAACATTCCTAATATTCCCGACGATATCAAGGCCCTTTACAAGACGGTTTGGGAAATCA 283606 Query 76773 ---AGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTC 76829 || | | | | || |||||| || |||||||| ||||||||||||| || Sbjct 283607 GCCAG-CGTACCA--TTATCACCATGGCTGCGGATCGTGGCGCCTTCATTGATCAATCTC 283663 Query 76830 AAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGT 76889 | || |||| | |||| || || || ||| |||| | |||| ||||| | Sbjct 283664 AGAGCTTGAACATTCACATGAAAGAGCCGACCATGGGCAAGATTACTTCGATGCACTTTG 283723 Query 76890 ACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941 | ||||| ||| ||||| || ||||||||||| |||||| | | ||| Sbjct 283724 CTGGTTGGAAGATGGGTCTCAAGACTGGAATGTACTACCTCCGAACCATGGC 283775 >seq110 Length=125662 Score = 93.3 bits (102), Expect = 5e-14 Identities = 326/499 (65%), Gaps = 10/499 (2%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | |||||| |||| ||| |||| | | ||| |||| || ||| Sbjct 62783 AAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGATGACAACTCTA-CCTTTGCATCGCG 62725 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140 || | || || || ||| ||||||||||||||| ||| | || ||| |||| | Sbjct 62724 TCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT-TGCATCTATCT 62666 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| | |||||||| ||||||||||| ||| | |||||| || |||||||| || | Sbjct 62665 TCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAACTTATCTCTC 62606 Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCT--TCAAGACTTTGCGTAATAG 65258 | || ||||| | ||| || |||||| |||| ||| || | || | Sbjct 62605 GCGACGAGGGAATGCACACCGACTTTGCCTGCCTCCTCTTCTCACAGCTCAAC--AAGAA 62548 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 || | | ||| | ||| ||||||| | | ||||| || | |||||| | | || Sbjct 62547 GCCTTCGCCTGAAGCCGTCCGCGCCATCATCACCGAGGCAGTACAAATTGAGCAGGAATT 62488 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | | || ||| | || || | | |||| ||||||||| |||| | |||| Sbjct 62487 CTTGAGCGAAGCATTACCGTGCAGATTGCTCGGCATGAACTCTACCCTCATGTGCCAGTA 62428 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCT-CAAACAAGTTGGGGTGCCACCCATTTGGAACG 65437 ||| |||| ||| | ||||||||| | | | | | || || ||| |||| Sbjct 62427 CATCGAGTTTGTTGCTGATCGTCTCTTGCTTGCGCTTGGCAATGTCA-AGGTTTACAACG 62369 Query 65438 CGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTG 65497 | || || || ||||| ||||| ||||| |||| || ||||| ||||| || | Sbjct 62368 CCGTCAACCCCTTCGACTTCATGGAGAACATATCTCTTGCCGGAAAGACTAACTTTTTCG 62309 Query 65498 AGAAGCGAGTTGGGGACTA 65516 ||||||| || || || || Sbjct 62308 AGAAGCGCGTCGGTGATTA 62290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561844595200