Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq597 150 2e-31 seq264 89.7 5e-13 >seq597 Length=589508 Score = 150 bits (166), Expect = 2e-31 Identities = 476/723 (66%), Gaps = 41/723 (6%) Strand=Plus/Minus Query 139306 TACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT 139364 ||||| |||||||| | ||||| |||| |||||||| || | |||| | | |||| Sbjct 282616 TACTTCTCGTAGAGAGCTTCGAACTCGT-CACCGTAGATATCGGCAAGACCAGGGCACTC 282558 Query 139365 GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGG 139424 || ||| |||||||| | ||| |||| ||| | ||||||| |||||||||| || || Sbjct 282557 GTGAGGGCACATGAGAGTCCAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGG 282498 Query 139425 AATCCACAAAGCGAACAGCAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTA 139479 ||||||||| || | | | ||| || || |||||| | | ||| || | Sbjct 282497 AATCCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCG------TGGTT 282444 Query 139480 CGTT-TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538 | || ||| | | | | || || || ||||||||||| || || |||||||| | Sbjct 282443 CTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 282384 Query 139539 TGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595 ||| || || |||||||||||||| |||| || ||| | || || || Sbjct 282383 TGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACG 282324 Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGC--GA 139653 | ||| || | |||||| ||| ||| ||||| || | | || | || | | Sbjct 282323 GAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCCAAT--GTATGATCCAGTG 282266 Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713 ||||||| | ||||| || | |||||| || || | || || || | | | ||| Sbjct 282265 GCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTTTGAAATCATAGCACAA 282206 Query 139714 -TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTG---ACCAGAAA 139769 || | | || ||||| ||||| || ||||| |||| ||||| | || || Sbjct 282205 GTCTTG-AGGGTGTCGTAGATACCCTCGATACTGTCCTCCT---TCGTGTCAATGAGGAA 282150 Query 139770 GCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGT 139829 ||| ||||| ||||||||| | ||||| || || || || || |||||||| Sbjct 282149 GCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGGGGAGGCGTGCGT 282090 Query 139830 GAA-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGT 139888 ||| ||||| || ||||| | | |||||| | || || |||| ||| ||||| Sbjct 282089 GAAGTATTTG-TTAGACATGTAGTTGTACGTCTGAATAGCAGATTCAATGTCCTCTCCGT 282031 Query 139889 GGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGA 139948 | || ||||| | || ||||| | ||||||||| || || || ||| || || Sbjct 282030 GAATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCGACCTTGC---CGC 281974 Query 139949 tttttttCAG-----ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAA 140003 || || || || | || ||| ||||||||| |||||||||| || ||||| Sbjct 281973 TTATTCGGAGTAGGTATGATCG--CTCCAGGGTCTTGAAGCCAAAGTATTGGTAATTGAA 281916 Query 140004 ATC 140006 ||| Sbjct 281915 ATC 281913 >seq264 Length=644297 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || | || || || | | Sbjct 590994 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACCTTGGAGGTTGAGTCATCA 590935 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | ||| || |||||||| ||||| || || || || || || || Sbjct 590934 GACACTATCGACAATGTTAAGAC-CAAGATCCAGGACAAGGAGGGTATCCCACCAGACCA 590876 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| ||||| || || || || ||| | | | |||| || || || Sbjct 590875 GCAGCGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCTTGTCCGACTACAA 590816 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || |||||||| | || | ||||| || Sbjct 590815 CATCCAGAAGGAATCCACTCTCCACTTGGTCCTACGTCTCCGCGGTGG 590768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891751331200