Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq111 129 9e-24 seq597 96.9 5e-14 seq110 91.5 2e-12 seq1 87.8 3e-11 >seq111 Length=124556 Score = 129 bits (142), Expect = 9e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||||||||||||||| |||||| |||| |||||| | || ||||||||||| ||||| Sbjct 88220 GCCGCCAACTACCTCGATATCAAGGCCCTTCTCGATGTCGGCTGCAAGACCGTTGCCAAT 88161 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||| ||||| |||||| || Sbjct 88160 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAAACCTTCAACATCCAG 88110 >seq597 Length=589508 Score = 96.9 bits (106), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 ||||| | ||| | ||||||||| | || | ||||| ||| ||||||||| | Sbjct 282553 GGGCACATGAGAGTCCAGTCGCCATTCTGTT-CGACGCGCTTCATGAACAGGTCGGGAAT 282495 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||||| | | || || ||||| || || || || || ||||||||||||||| |||| Sbjct 282494 CCACAAGGCATAGAAAAGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAG 282435 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 2071997 || | ||||| || || ||||||||||| ||||| |||||| ||| || || || Sbjct 282434 ATCTAACCAGTTGAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGG 282375 Query 2071998 GCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 282374 ACGCTTGTTGCCACC 282360 >seq110 Length=125662 Score = 91.5 bits (100), Expect = 2e-12 Identities = 205/300 (68%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || |||||| |||||||||||| ||||| || | || || || |||||| Sbjct 62290 TAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTCCATG 62349 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGGCG 794026 | ||| |||||| | | ||| ||| | || |||| | ||||| || || Sbjct 62350 AAGTCGAAGGGGTTGACGGCGTTGTAAACCTTGACATTGCCAAGCGCAAGCAAG-AGACG 62408 Query 794027 GTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGA-TGAGCGCCA 794085 || || || || || ||||||||||||||||||| | ||||||||||| | | || Sbjct 62409 ATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCTGCA 62468 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145 | || | | ||||| | || || | ||| || | || |||||| ||||||| || Sbjct 62469 C-GGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGAT-GGCG 62526 Query 794146 TGGGC-ACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 || | | || | ||| ||||| | | |||| | | |||| ||||||||||||||| Sbjct 62527 CGGACGGCTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAGAGGAGGCAGGCAAAGTCG 62586 Score = 89.7 bits (98), Expect = 8e-12 Identities = 136/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||||||| ||| | ||||||| ||| | |||||||||||| ||||||||| Sbjct 62596 CCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTC 62655 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | || ||| ||| ||||| |||||||| || || || Sbjct 62656 TTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATACCCTCGACAGCTGCGAAT 62715 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAG-GCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||||||| ||| ||||| || || | || | | |||||||||| ||||| Sbjct 62716 GCGACGAGACGCGATGCAAAGGT----AGAGTTGTCATCGCAAATCCACTTCAGTGCCCA 62771 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 62772 GTCGGCCTTCTT 62783 >seq1 Length=1051074 Score = 87.8 bits (96), Expect = 3e-11 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 2411401 GCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGG 2411460 || |||||||||||||| |||||| ||||| || || || |||| ||||| | |||| Sbjct 532064 GCGTCGCTGGCGCTCATTTTGCCG-CCTTG--TAGACCGGGGACCATGGGGTTCATCAGG 532008 Query 2411461 TGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTG 2411520 ||| ||| | |||||||| | || ||| || || | || || || ||| Sbjct 532007 TGGGCGCGTTGTCGGTAGCCGATTTTGGGGAGGGATTCTTTTGCGAGGGTGAATATTTTG 531948 Query 2411521 CGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGC 2411580 || |||||| ||||| || |||||||| ||||| ||||| | ||| || | ||| Sbjct 531947 CGTTGGTCGACGCCGCCGAATTGGGCGTCTACGTCTAGGTGTTCCTCATCTAAACATTGC 531888 Query 2411581 ATGAGCGGGTAGAC 2411594 |||| |||||||| Sbjct 531887 ATGATTGGGTAGAC 531874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916135770456560