Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq264 93.3 8e-14 seq520 84.2 4e-11 >seq264 Length=644297 Score = 93.3 bits (102), Expect = 8e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||| || || || ||||| || || || || | | | || Sbjct 590551 ACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCC 590610 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| | || ||||| || ||||| || | || ||||||||||| || |||||||| Sbjct 590611 ATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTT 590670 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| | || || || || || || ||| | ||| ||||| | || || Sbjct 590671 GTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAAT 590730 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| || || || ||||| Sbjct 590731 AGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 590766 >seq520 Length=276588 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || || | ||| |||||||||||||||| || ||||| ||||| || ||||| ||| Sbjct 100425 CCATCCTCCAATTGCTTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCC 100484 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || ||||| ||||| | || ||||| || || || ||| | || || || | || Sbjct 100485 TTGTCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTG 100544 Query 82773 ATCGTCTTGCCTGT 82786 || |||||||| || Sbjct 100545 ATGGTCTTGCCCGT 100558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814117152560