Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq110 132 5e-26 seq597 105 6e-18 seq264 105 6e-18 >seq110 Length=125662 Score = 132 bits (146), Expect = 5e-26 Identities = 345/520 (66%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || |||||||| ||||| |||||||| || || || | | || ||||| | Sbjct 62286 CTGGTAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTC 62345 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| ||||| | || | ||| | | | | || Sbjct 62346 CATGAAGTCGAAGGGGTTGACGGCGTTGTAAACCTTGACATTGCCAAGCGCAAGCAAGAG 62405 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAA-CG 120529 || || || |||||||| ||||||| ||||||| | ||||||||| ||||| | Sbjct 62406 ACGATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCT 62465 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 ||| || || || | || || |||| |||||| | || ||||| ||| |||| Sbjct 62466 GCAC-GGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGG 62524 Query 120590 CGAGCATAGTGTG-GCCG--GGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 || | | | | | || ||| |||||| || || | | || ||||| | Sbjct 62525 CGCGGACGGCTTCAGGCGAAGGCTTCTTGT------TGAGCTGTGAGAAGAGGAGGCAGG 62578 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 ||||||| ||||||| ||||||||||| || || || |||||| || |||| ||||| Sbjct 62579 CAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCCGG 62638 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||||| || | |||||| |||| || | |||||| ||| ||||| | | Sbjct 62639 GCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATAC 62698 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG---A 120823 |||| || || || ||||| | ||| || || || | ||| ||| | Sbjct 62699 CCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGT---AGAGTTGTCATCGCAAA 62755 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||||||||| ||||| |||||||| ||||| | ||| || Sbjct 62756 TCCACTTCAGTGCCCAGTCGGCCTTCTTGCGGATGCAGGG 62795 >seq597 Length=589508 Score = 105 bits (116), Expect = 6e-18 Identities = 595/935 (64%), Gaps = 36/935 (4%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTTATCTTCATC 148118 || |||||||| |||||||| || || ||||| || | || |||| | || Sbjct 283658 TGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGATAATGGTACGCTGGCTG---ATT 283602 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 ||||| |||||||||| || |||||||| |||||||| ||| ||| | Sbjct 283601 TCCCAAACCGTCTTGTAAAGGGCCTTGATATCGTCGGGAATATTAGGAATGTTCTGGATA 283542 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238 || || | | |||| || |||| ||| | ||||| | || | ||||| Sbjct 283541 GAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGACCAAAGACCCATCTCGACG 283482 Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 || || | || ||| | | || || || || || || || || ||||| || || ||| Sbjct 283481 AGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCCAGCAAGCACACGACG-AGA 283423 Query 148299 -TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357 || | || ||| | || || || |||||||| || | ||| || | || | Sbjct 283422 GTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACCGAGAATTTGAGATGTGGA 283363 Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417 || || ||||| || || || || |||||||| | |||| | || || || | Sbjct 283362 AGCAGTTGGCATAGGAGCAACAAGAAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGC 283303 Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477 ||| || | ||||||||||||| || || || |||||||||||||||||||| || Sbjct 283302 CTTGAGCGAGTCCCAGTCCCAGAGATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAG 283243 Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||| || || | | || ||||||||| | |||| | || | | || || Sbjct 283242 AATACCCTGGGAAACTGGAGAGCCCTCGTAGGTTTTGTATGTGCCTTCTTCTTGTGCAAG 283183 Query 148538 TTCGCAGCTCGCC-TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 | |||| | || || ||| | | |||||| |||||| ||||| |||| ||| Sbjct 283182 CTTGCAGGAAGAGGTCAAG-GCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTAAGCT 283124 Query 148597 GCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 | ||| ||| ||| | |||| || || | || || || ||||| | Sbjct 283123 TCTTTGCC---TCGGGAGACTCGAAGGGCAGGCGAAGAGCAAGGAAAGCATCCGCAAGAC 283067 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCG 148713 ||||||| || || || | ||| ||||| |||| | | || || || || Sbjct 283066 CCTGTACACCAACACCGACGGGACGGTGACGGGAGTTGCTGTTGTATGCT-TCGGGAACG 283008 Query 148714 GA-TAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCT 148771 | ||||||||| ||| |||||||||| |||| ||||| | || |||| | || Sbjct 283007 GGGTAGTGGTTGACGTCAATGATCTTGTTCAAG-TTGCGAATGACAG--TTTGGACGACT 282951 Query 148772 GCG--CAGCAATTCAAAATCGTAC--------TTGT-CATCTACGATGCATCGGTTCACG 148820 || || | | ||||| || ||| | || |||| | | | || Sbjct 282950 TCGTGCAACTTGTTGAAATCATAGACGCCGCGTTGAACGTCAACGAAGGTTGG---CAAA 282894 Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 || || || || | ||||| || || |||||| || || |||||| | |||||| Sbjct 282893 GCCATGGATGCCAAGTTGCAAACAGCGACCTCATCAGGCGCAGAGTACTCAATGATCTCA 282834 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | |||||||||| || || |||| |||||| ||||||||||||| |||||| Sbjct 282833 GTGCACAGATTGGAGCTACGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCAA 282774 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 || || ||||| |||||| | || |||||| || Sbjct 282773 GCATCTTTGTAAAGCATGAAAGGGTTGCCAGTCTC 282739 >seq264 Length=644297 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| |||| || ||| | | | || || | Sbjct 590561 AAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCA-TCTTCCAA 590619 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | ||||| |||||||| || ||||| || ||||||||||| ||| Sbjct 590620 CTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGAT 590679 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||| | || || || |||| || | || ||||| Sbjct 590680 CTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCC 590739 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || ||||| || ||||| Sbjct 590740 GGTGAGGGTCTTCACGAAGATTTGCAT 590766 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| ||| || ||| | | | || || || |||||||| Sbjct 590798 GTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCA-TCTTCAAGTTGCTTGCC 590856 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 590857 GGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTT 590916 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | ||| || || | ||||| ||| ||||| |||| ||| Sbjct 590917 AACATTGTCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGT 590976 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 590977 CTTGACGAAGATCTGCAT 590994 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || | || | | | ||||||||||||||||| Sbjct 591026 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCA-TCCTCGAGCTGCTTGCC 591084 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||| || |||||||| ||||| ||| Sbjct 591085 GGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTT 591144 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | || | |||||| | | ||| || || | ||||| || || ||||||| Sbjct 591145 GACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 591200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414515529600