Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17]
1,040 sequences; 62,487,368 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq110 132 5e-26
seq597 105 6e-18
seq264 105 6e-18
>seq110
Length=125662
Score = 132 bits (146), Expect = 5e-26
Identities = 345/520 (66%), Gaps = 17/520 (3%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || |||||||| ||||| |||||||| || || || | | || ||||| |
Sbjct 62286 CTGGTAATCACCGACGCGCTTCTCGAAAAAGTTAGTCTTTCCGGCAAGAGATATGTTCTC 62345
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| ||||| | || | ||| | | | | ||
Sbjct 62346 CATGAAGTCGAAGGGGTTGACGGCGTTGTAAACCTTGACATTGCCAAGCGCAAGCAAGAG 62405
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAA-CG 120529
|| || || |||||||| ||||||| ||||||| | ||||||||| ||||| |
Sbjct 62406 ACGATCAGCAACAAACTCGATGTACTGGCACATGAGGGTAGAGTTCATGCCGAGCAATCT 62465
Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
||| || || || | || || |||| |||||| | || ||||| ||| ||||
Sbjct 62466 GCAC-GGTAATGCTTCGCTCAAGAATTCCTGCTCAATTTGTACTGCCTCGGTGATGATGG 62524
Query 120590 CGAGCATAGTGTG-GCCG--GGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646
|| | | | | | || ||| |||||| || || | | || ||||| |
Sbjct 62525 CGCGGACGGCTTCAGGCGAAGGCTTCTTGT------TGAGCTGTGAGAAGAGGAGGCAGG 62578
Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706
||||||| ||||||| ||||||||||| || || || |||||| || |||| |||||
Sbjct 62579 CAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATAAGTTCGTTGGAGAAGGTCAAGCCGG 62638
Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766
|||||| || | |||||| |||| || | |||||| ||| ||||| | |
Sbjct 62639 GCATGAGACCGCGCTTCTTGAGCCAGAAGATAGATGCAAAGGCGCCGCTGAAGAAGATAC 62698
Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG---A 120823
|||| || || || ||||| | ||| || || || | ||| ||| |
Sbjct 62699 CCTCGACAGCTGCGAATGCGACGAGACGCGATGCAAAGGT---AGAGTTGTCATCGCAAA 62755
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
||||||||| ||||| |||||||| ||||| | ||| ||
Sbjct 62756 TCCACTTCAGTGCCCAGTCGGCCTTCTTGCGGATGCAGGG 62795
>seq597
Length=589508
Score = 105 bits (116), Expect = 6e-18
Identities = 595/935 (64%), Gaps = 36/935 (4%)
Strand=Plus/Minus
Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTTATCTTCATC 148118
|| |||||||| |||||||| || || ||||| || | || |||| | ||
Sbjct 283658 TGATCAATGAAGGCGCCACGATCCGCAGCCATGGTGATAATGGTACGCTGGCTG---ATT 283602
Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178
||||| |||||||||| || |||||||| |||||||| ||| ||| |
Sbjct 283601 TCCCAAACCGTCTTGTAAAGGGCCTTGATATCGTCGGGAATATTAGGAATGTTCTGGATA 283542
Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238
|| || | | |||| || |||| ||| | ||||| | || | |||||
Sbjct 283541 GAACCACCCTCTGCAATGATACGATTCTTCATGTTGTCCGACCAAAGACCCATCTCGACG 283482
Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298
|| || | || ||| | | || || || || || || || || ||||| || || |||
Sbjct 283481 AGATCTTTGAGCAGCCATGGGTTGACGACTTGGAATTCCCCAGCAAGCACACGACG-AGA 283423
Query 148299 -TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGT 148357
|| | || ||| | || || || |||||||| || | ||| || | || |
Sbjct 283422 GTAGATATTTGACGTGTATGGCTCGAAGCACTCGTTGAAACCGAGAATTTGAGATGTGGA 283363
Query 148358 TGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCG 148417
|| || ||||| || || || || |||||||| | |||| | || || || |
Sbjct 283362 AGCAGTTGGCATAGGAGCAACAAGAAGTGAGTTGCGAATACCGTGCTTCTTGATATCAGC 283303
Query 148418 CTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAG 148477
||| || | ||||||||||||| || || || |||||||||||||||||||| ||
Sbjct 283302 CTTGAGCGAGTCCCAGTCCCAGAGATCCGTAGGAGTGACGTTCCACATGTCGTACTGGAG 283243
Query 148478 AATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537
||| || || | | || ||||||||| | |||| | || | | || ||
Sbjct 283242 AATACCCTGGGAAACTGGAGAGCCCTCGTAGGTTTTGTATGTGCCTTCTTCTTGTGCAAG 283183
Query 148538 TTCGCAGCTCGCC-TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596
| |||| | || || ||| | | |||||| |||||| ||||| |||| |||
Sbjct 283182 CTTGCAGGAAGAGGTCAAG-GCGGCATGGTAAATGGTCTCGAAGATTTGAATGTTAAGCT 283124
Query 148597 GCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653
| ||| ||| ||| | |||| || || | || || || ||||| |
Sbjct 283123 TCTTTGCC---TCGGGAGACTCGAAGGGCAGGCGAAGAGCAAGGAAAGCATCCGCAAGAC 283067
Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCG 148713
||||||| || || || | ||| ||||| |||| | | || || || ||
Sbjct 283066 CCTGTACACCAACACCGACGGGACGGTGACGGGAGTTGCTGTTGTATGCT-TCGGGAACG 283008
Query 148714 GA-TAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCT 148771
| ||||||||| ||| |||||||||| |||| ||||| | || |||| | ||
Sbjct 283007 GGGTAGTGGTTGACGTCAATGATCTTGTTCAAG-TTGCGAATGACAG--TTTGGACGACT 282951
Query 148772 GCG--CAGCAATTCAAAATCGTAC--------TTGT-CATCTACGATGCATCGGTTCACG 148820
|| || | | ||||| || ||| | || |||| | | | ||
Sbjct 282950 TCGTGCAACTTGTTGAAATCATAGACGCCGCGTTGAACGTCAACGAAGGTTGG---CAAA 282894
Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880
|| || || || | ||||| || || |||||| || || |||||| | ||||||
Sbjct 282893 GCCATGGATGCCAAGTTGCAAACAGCGACCTCATCAGGCGCAGAGTACTCAATGATCTCA 282834
Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940
| |||||||||| || || |||| |||||| ||||||||||||| ||||||
Sbjct 282833 GTGCACAGATTGGAGCTACGAATGGTTCCCAAGTTCTTCTGATTGCTCTTGCGGTTGCAA 282774
Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
|| || ||||| |||||| | || |||||| ||
Sbjct 282773 GCATCTTTGTAAAGCATGAAAGGGTTGCCAGTCTC 282739
>seq264
Length=644297
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| |||| || ||| | | | || || |
Sbjct 590561 AAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCA-TCTTCCAA 590619
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | ||||| |||||||| || ||||| || ||||||||||| |||
Sbjct 590620 CTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTCCTGGAT 590679
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||| | || || || |||| || | || |||||
Sbjct 590680 CTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGTAATAGTCTTGCC 590739
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || ||||| || |||||
Sbjct 590740 GGTGAGGGTCTTCACGAAGATTTGCAT 590766
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || ||||| ||| || ||| | | | || || || ||||||||
Sbjct 590798 GTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCA-TCTTCAAGTTGCTTGCC 590856
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| || ||||| || |||||||| |||||| |||
Sbjct 590857 GGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTT 590916
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| | | ||| || || | ||||| ||| ||||| |||| |||
Sbjct 590917 AACATTGTCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGT 590976
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 590977 CTTGACGAAGATCTGCAT 590994
Score = 86.0 bits (94), Expect = 6e-12
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | || | | | |||||||||||||||||
Sbjct 591026 GTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCA-TCCTCGAGCTGCTTGCC 591084
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| || ||||| || |||||||| ||||| |||
Sbjct 591085 GGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTT 591144
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | || | |||||| | | ||| || || | ||||| || || |||||||
Sbjct 591145 GACGTTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 591200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483414515529600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |