Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq597 111 1e-19 seq264 87.8 2e-12 >seq597 Length=589508 Score = 111 bits (122), Expect = 1e-19 Identities = 454/707 (64%), Gaps = 9/707 (1%) Strand=Plus/Minus Query 147706 TCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGAC 147765 || |||||||| |||||| ||||||||| || || |||| || || ||||| || | | Sbjct 282598 TCGAACTCGTCACCGTAGATATCGGCAAGACCAGGGCACTCGTGAGGGCACATGAGAGTC 282539 Query 147766 CACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATA 147825 || | | | | | ||||| ||| ||||| || || | ||||| || || | | Sbjct 282538 CAGTCGCCATTCTGTTCGACGCGCTTCATGAACAGGTCGGGAATCCACAAGGCATAGAAA 282479 Query 147826 AGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATA 147884 ||||| || || || || ||| ||| | ||| || ||| || | | | Sbjct 282478 AGATCACGAGCACGCGCTTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCA-GTTGAA 282420 Query 147885 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCC 147941 || ||||||||||| || || | ||||| ||| | ||||| |||||| || || Sbjct 282419 GACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACC 282360 Query 147942 CTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGC 148001 || || || | ||| | | || ||| || || | ||| || | || ||| ||| Sbjct 282359 TTGATCAACGTAGCGAGCAGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGA 282300 Query 148002 AGTGCCGTTGGTGGAATTGATCT-TGCTGCCGCGGGCTCGCACTTCG-TGCACGTTAACG 148059 |||||||| || || | || | | | || |||| | | || || | ||||| | Sbjct 282299 TGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGG-CTCGGA-TGCGATGTATGTTAAGG 282242 Query 148060 CCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCG 148119 || || || || || |||||| || ||| ||| | || |||||| || Sbjct 282241 CCGATACCACCAGCGGTCTTTGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCC 282182 Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179 ||||| ||||| | || | ||| | || || || | | |||||| | || Sbjct 282181 TCGATACTGTCCTCCTTCGTGTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTG 282122 Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239 || || |||||| ||||| |||||||| || |||| | | ||| | ||| Sbjct 282121 CCTGCGTTGAAAAGTGTGGGGGAGGCGTGCGTGAAGTATTTGTTAGACATGTAGTTGTAC 282062 Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299 |||| |||||| ||| ||||| || ||||||||||| | || || ||||||| ||| Sbjct 282061 GTCTGAATAGCAGATTCAATGTCCTCTCCGTGAATGCCGACTGCCACACGCATGATCATA 282002 Query 148300 TGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTT 148359 || ||||| || || || || | | | || ||| || ||| || ||||| Sbjct 282001 TGTTGTGGACGCTCAGCGACCTTGCCGCTTATTCGGAGTAGGTATGATCGCTCCAGGGTC 281942 Query 148360 TTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 ||| | |||||||| | ||||| |||||| ||||| | ||||| Sbjct 281941 TTGAAGCCAAAGTATTGGTAATTGAAATCTCTGTCGTATACAATGGC 281895 >seq264 Length=644297 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||||||| ||||| |||||| Sbjct 590558 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGTCCATCTTCC 590617 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 | ||| || |||| |||| || ||||| ||||||||||| || ||||| || || Sbjct 590618 AACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTCCTTGTC 590673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605004054400