Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq110 145 1e-28 >seq110 Length=125662 Score = 145 bits (160), Expect = 1e-28 Identities = 202/276 (73%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 1455785 ATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA 1455844 |||||| || ||||| |||||| |||||||||||||| ||| |||| ||| | || Sbjct 63174 ATGTAC-AAGAAGGCAATGGCCTCATTTTGGACCGCCGAAGAGATCGATCTCTCCAAAGA 63116 Query 1455845 CACGGTCCA--CTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTC 1455899 | | |||| |||| ||| ||| ||||||||| ||| ||||||| ||| | Sbjct 63115 C--GTTCCAGACTGGAACAACCGCCTGAACGACGACGAACGCTTTTTCATCTCACACATT 63058 Query 1455900 CTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTAT 1455959 ||||| ||||| ||| || ||||||||||| ||||||||| || || |||| Sbjct 63057 CTCGCATTTTT-CGCAGCATCGGATGGCATCGTCAACGAGAACCTCCTCGAACGTTTTAG 62999 Query 1455960 GAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAA 1456019 || || || || | ||||| || || | |||||||| || || |||||||| ||||| Sbjct 62998 CAACGAAGTTCAGGTTCCAGAAGCCCGATGCTTTTACGGTTTTCAAATCGCCATGGAAAA 62939 Query 1456020 CATCCACTCTGAAACCTACTCGCTCCTGATCGACAC 1456055 |||||| || || || ||||| ||||||||||| || Sbjct 62938 CATCCATTCCGAGACATACTCCCTCCTGATCGAGAC 62903 Score = 107 bits (118), Expect = 3e-17 Identities = 142/189 (75%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||||||||||| |||||||||| | | || | || || |||||| || Sbjct 62783 AAGAAGGCCGACTGGGCACTGAAGTGGATTTGCGATGACAAC-TCTAC-CTTTGCATCGC 62726 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC-ATC 1456240 | ||||||| || || || |||||||| ||||| ||| ||| || ||| | ||| Sbjct 62725 GTCTCGTCGCATTCGCAGCTGTCGAGGGTATCTTCTTCAGCGGCGCCTT-TGCATCTATC 62667 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300 || ||||||||||||||||| ||||||||||| ||| ||| ||||||| ||||| Sbjct 62666 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGG-CTTGACCTTCTCCAACGAACTTATCTC 62608 Query 1456301 TCGCGACGA 1456309 ||||||||| Sbjct 62607 TCGCGACGA 62599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177710890088480