Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17]
1,040 sequences; 62,487,368 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq264 114 1e-20
>seq264
Length=644297
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| |||||| || | || || || ||||| || || ||
Sbjct 590804 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAG 590863
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | || | | |||||||||| |||||| ||| | | |
Sbjct 590864 ATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTTAACATTG 590923
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || || ||||||| ||||| || || ||||||||||| || ||
Sbjct 590924 TCGATAGTGTCTGATGACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACG 590983
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 590984 AAGATCTGCAT 590994
Score = 89.7 bits (98), Expect = 5e-13
Identities = 124/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | |||||| | || || |||||||| || || ||
Sbjct 591031 CTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAA 591090
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | || | | ||||||||| ||||| ||| | ||
Sbjct 591091 GATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGT 591149
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
|| | | |||||||| || || ||||| | |||||||| || || ||||
Sbjct 591150 TGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCCGGTCA 591200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450787739683200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |