Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq264 100 3e-16 seq265 87.8 2e-12 >seq264 Length=644297 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554 || || | ||| | ||| | || || ||||| || ||||||||||||| |||| || | Sbjct 590549 AGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAC-GTACG 590607 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || | ||| || || || || || | ||||||||||| || || || ||||| Sbjct 590608 TCCATCTTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCTGGAGGAATACCTTC 590667 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || ||||| ||| | ||||| || ||||| || ||||| || Sbjct 590668 CTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCAGAGGATTCAACTTCGAGTGT 590727 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || ||||| | || || ||||| |||||||| Sbjct 590728 AATAGTCTTGCCGGTGAGGGTCTTCACGAAGATTTGCAT 590766 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||||||||| || |||||||||||| Sbjct 590768 CCACCGCGGAGACGTAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 590827 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || || || ||||| || || ||||| |||||||| || || || Sbjct 590828 AAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 590887 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | ||||| || || || || Sbjct 590888 ATACCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATAGTGTCTGATGACTCAACC 590947 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || ||||| || ||||| || ||||| Sbjct 590948 TCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || ||||||||||| Sbjct 590996 CCACCACGGAGGCGGAGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAG 591055 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || ||||| |||||||| || || || Sbjct 591056 AGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 591115 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| || ||||| ||| | |||||| || || || Sbjct 591116 ATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTCAACC 591175 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || || || || || || ||||| Sbjct 591176 TCAAGGGTGATCGTCTTTCCGGT 591198 >seq265 Length=369171 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540 ||| | || || | |||||| | |||||||| || || || ||||| || ||||||||| Sbjct 48732 GCCATACCACCACGGAGTCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAG 48791 Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 || | |||| | || |||||||| ||||| || || ||||| |||||||| || Sbjct 48792 TCCGATAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCT 48851 Query 134601 GGCGGTATGCCTTCTTTTTCT 134621 || || || ||||| || ||| Sbjct 48852 GGGGGGATTCCTTCCTTGTCT 48872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505391829820800