Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq597 120 4e-22 >seq597 Length=589508 Score = 120 bits (132), Expect = 4e-22 Identities = 550/856 (64%), Gaps = 16/856 (2%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATT 69653 || || ||||| || || ||||||||||| | || ||| || ||||| | | | Sbjct 282520 ACGCGCTTCATGAACAGGTCGGGAATCCACA-AGGCATAGAAAAGATCACGAGCACGCGC 282462 Query 69654 TTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713 |||||| || || || ||| | ||||| | | | | | ||| | |||||||| Sbjct 282461 TTCTTCTTTGCCGTGGTTCTTTCTCAGATCTAACCAGTTGAAGACATCGGCGTGCCATGG 282402 Query 69714 TTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGC 69773 || || || || || | | || || || || || || || ||||| | ||| | || Sbjct 282401 CTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCACCTTGATCAACGTAGCGAGC 282342 Query 69774 AGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGA 69833 ||| | | |||| | ||||| |||| || ||| || ||| | || |||||||| Sbjct 282341 AGTCGCGTCAAAGACACGGAGCATAGGAACAAGACCGTTCGATGTGCCGTTTGTTCCTCC 282282 Query 69834 AATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTT 69893 ||| || ||| | || || || | || || || || || || || | || Sbjct 282281 AATGTATGATCCAGTGGCTCGGATGCGATGTATGTTAAGGCCGATACCACCAGCGGTCTT 282222 Query 69894 AGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 || || | ||||||| || | ||||| || |||||||| || || || || || | Sbjct 282221 TGAAATCATAGCACAAGTCTTGAGGGTGTCGTAGATACCCTCGATACTGTCCTCCTTCGT 282162 Query 69954 GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGG 70013 || || || || || || | ||| | || || || || || || | ||| || Sbjct 282161 GTCAATGAGGAAGCAAGACGAGAGTTGCGGTTGAGGTGTGCCTGCGTTGAAAAGTGTGGG 282102 Query 70014 AGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072 || ||||| ||||| |||| | ||| | | || ||||| || | |||||| ||||| | Sbjct 282101 GGAGGCGTGCGTGAAGTATTTGTTAGACATGTAG-TTGTACGTCTGAATAGCAGATTCAA 282043 Query 70073 TATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131 | ||| | | | ||||| || | || |||||||| | |||||| || || || || | Sbjct 282042 TGTCCTCTCCG-TGAATGCCGACTGCCACACGCATGATCATATGTTGTGGACGCTCAGCG 281984 Query 70132 GTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTG 70191 || ||||| | ||||||||| ||||| || || || ||||| || | | Sbjct 281983 ACCTTGCCGCTTATTCGGAGTAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGG 281924 Query 70192 TA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAA 70249 || ||||| ||||| ||||| | ||| |||| || | | |||| || || | | Sbjct 281923 TAATTGAAA--TCTCTGTCGTATACAATGGCAGAGTTCAACTCATCCGCATGCTTCATGA 281866 Query 70250 CTATATCCATAACAGTAGGT--GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAAC 70307 | | | || | | || || || || || || || || || || || | Sbjct 281865 CGGTGT-TGTATGTG-ATGTCCGAAATCATAGGGCATTTCTTGTTGTTCTTTGGGTTGAT 281808 Query 70308 ATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATT 70367 ||| | | | | |||| || ||| || || | || || |||| |||||| | ||| Sbjct 281807 ATAATCGTAGAGGTCTTGGATGACAGCAGAGAACTGCTTCTTGGTTTGCTTGTGAAGATT 281748 Query 70368 TGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-G 70426 ||||| ||| || | ||||| || || || ||||| ||||| |||| | || ||| | Sbjct 281747 TGATACGGCGATACGTGCTGCAAGGATTGCGTAGTCGGGATG-TGTGACGGTCATGTACG 281689 Query 70427 CTGCTATTTCCGCAGC 70442 ||||| | || || || Sbjct 281688 CTGCTGTCTCAGCGGC 281673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686899870185600