Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq264 152 2e-31 seq134 95.1 4e-14 seq520 91.5 4e-13 >seq264 Length=644297 Score = 152 bits (168), Expect = 2e-31 Identities = 489/746 (66%), Gaps = 22/746 (3%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||||| ||||| || || || || || | | ||| | |||| ||| Sbjct 635211 GCTATCGGTATCGATTTGGGTACCACGTACTCCTGCGTGGGTATTTTCAGAGATGACCGT 635270 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| ||||| || || || |||||| | ||||| ||||| | |||||| || || Sbjct 635271 ATCGAAATCATTGCGAACGACCAGGGTAACCGCACAACACCATCCTTCGTTGCCTTCACA 635330 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || ||| | |||||||| || || || || || | || || || || Sbjct 635331 GATACGGAACGTCTCATTGGTGACTCGGCGAAGAACCAGGTCGCCATGAACCCCGTCAAC 635390 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACA 349432 || || || ||||| ||||| || || ||| | |||||| | |||| || Sbjct 635391 ACTGTCTTCGATGCCAAGCGCCTCATAGGTCGCAAGTTTGCCGATGCTGAGG--TC---- 635444 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGA-CGGTGATAAACCAAT 349491 || ||||| | || || || || || | | || | | ||| ||| || || | Sbjct 635445 CAGGCTGATATGAAGCACTTCCCCTTCAAGATCGT-CGACAAGCTCGGC---AAGCCTGT 635500 Query 349492 TATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAA 349550 | | || |||| | || || || || || || || ||| || || || || || | Sbjct 635501 TGTCCAGATTGAGTTCAAGGGCGAGACCAAGACT-TTCACACCAGAGGAGATCTCCTCCA 635559 Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATG 349610 || | || || ||| || | |||||| |||| | || | || || | | | Sbjct 635560 TGATCTTGACCAAGATGCGCGAGACCGCTGAATCATACCTCGGAGGTACCGTCAACAACG 635619 Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670 | || | || || ||||| || || || || | ||||| || ||||| || || | Sbjct 635620 CCGTCGTCACAGTCCCAGCATACTTCAACGACTCGCAGCGACAAGCCACAAAGGACGCCG 635679 Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730 | |||||| || | ||||| || | || || || |||||||| || || || || | Sbjct 635680 GTCTCATTGCTGGCCTCAATGTCCTTCGTATCATCAACGAACCCACAGCCGCTGCCATCG 635739 Query 349731 CATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 | ||||| || || || | | | || || || | ||||| || ||| | ||| Sbjct 635740 CTTATGGTCTCGACAAGAAG-GCCACTGGTGAGCGCAACGTCCTTATCTTCGATCTCGGT 635798 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 || || || || ||||| || || | || |||| ||||| ||||| || || || | Sbjct 635799 GGAGGAACCTTCGATGTGTCTCTTTTGACCATTGAGGAGGGTATTTTCGAGGTCAAGTCC 635858 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||||||||| || || | || || ||||| || || || |||||||| || || Sbjct 635859 ACTGCTGGTGACACTCACTTGGGCGGTGAAGACTTCGACAACCGTCTCGTCAACCACTTC 635918 Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAA 349935 || || ||||| ||||| |||| ||| Sbjct 635919 GTCAACGAATTCAAGCG-CAAGGTAA 635943 Score = 109 bits (120), Expect = 2e-18 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | ||| || | || ||||| || || || || || || | Sbjct 590760 TTTGCATACCACCGCGGAGACGTAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGT 590819 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || |||||||||||||| || || || ||||| | || ||||| | Sbjct 590820 AGTCGGACAAGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGT 590879 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || || ||||| || || | || ||||| || || | || |||| Sbjct 590880 CTGGTGGGATACCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATAGTGTCTGATG 590939 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | || | ||||| || || | || || || || |||||||| Sbjct 590940 ACTCAACCTCCAAGGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Score = 91.5 bits (100), Expect = 4e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 590992 CATACCACCACGGAGGCGGAGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTC 591051 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| ||||| || || || || || || ||||| | || ||||| || || Sbjct 591052 TGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGG 591111 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || || ||||| || | || || || || || | || | || Sbjct 591112 TGGGATTCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCGCTAGACTC 591171 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 ||| ||||| || | ||||||||||| | ||| Sbjct 591172 AACCTCAAGGGTGATCGTCTTTCCGGTCACTGT 591204 >seq134 Length=107842 Score = 95.1 bits (104), Expect = 4e-14 Identities = 98/128 (77%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || |||||| || || | ||||| || || |||||||| ||| Sbjct 58544 CGAGGAACACCAAGCGTCACATTC---TTTGACGAGACACCGGCGAAATGGAAAGTGTTA 58600 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||| || | ||| |||||||| ||||| ||||||| |||||||||||| || Sbjct 58601 AGCGTCATTTGTGTTGCGGGTTCACCAATCGACTGTGCTGCAAGAACGCCAACCATGTCA 58660 Query 377578 CCAGGATT 377585 || || || Sbjct 58661 CCCGGGTT 58668 >seq520 Length=276588 Score = 91.5 bits (100), Expect = 4e-13 Identities = 138/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 |||| ||| | | | ||||| || || || || || || || ||||| || | ||| Sbjct 100381 TGAAAAGTCG-CACCTTTTGGATGTTGTAGTCGCTCAAGGTACGTCCATCCTCCAATTGC 100439 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 |||||||||||||||| || || || || || |||||||| || || || || || || Sbjct 100440 TTTCCAGCAAAGATTAATCGCTGTTGGTCTGGCGGAATTCCCTCCTTGTCTTGGATCTTG 100499 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 | || ||||| || || | ||||| | || || ||||| || | ||||| || || Sbjct 100500 GTCTTGACATTGTCGATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTG 100559 Query 140715 AGTGTTTTTACAAAA 140729 || ||||| || ||| Sbjct 100560 AGGGTTTTGACGAAA 100574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515234209235120