Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq597 143 3e-29 >seq597 Length=589508 Score = 143 bits (158), Expect = 3e-29 Identities = 360/541 (67%), Gaps = 6/541 (1%) Strand=Plus/Plus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||||||| ||| ||| | || ||||| ||||||||| | || || || ||||||| Sbjct 282058 AGACGTACAACTACATGTCTAACAAATACTTCACGCACGCCTCCCCCACACTTTTCAACG 282117 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 | || || ||| || || | ||| |||||||| | | | |||||| ||| | Sbjct 282118 CAGGCACACCTCAACCGCAACTCTCGTCTTGCTTCCTCATTGACACGAAGGAGGACAGTA 282177 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 |||| || |||||||| || |||||| ||||| || || ||| | ||||||| Sbjct 282178 TCGAGGGTATCTACGACACCCTCAAGACTTGTGCTATGATTTCAAAGACCGCTGGTGGTA 282237 Query 53424 TCGGTATCCAC-TGC-TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 |||| | || | | ||| | |||| || | || || || || || ||||| Sbjct 282238 TCGGCCTTAACATACATCGCA--TCCGAGCCACTGGATCATACATTGGAGGAACAAACGG 282295 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | | || | || ||||||||||| ||||| || || || || ||||| | Sbjct 282296 CACATCGAACGGTCTTGTTCCTATGCTCCGTGTCTTTGACGCGACTGCTCGCTACGTTGA 282355 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || ||||| ||||| || | |||||||||||||||||||| ||||||||||| Sbjct 282356 TCAAGGTGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCATGGCACGCCGA 282415 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 | | | | | || ||| | ||| || || | ||||| ||| ||| |||| Sbjct 282416 TGTCTTCAACTGGTTAGATCTGAGAAAGAACCACGGCAAAGAAGAAGCGCG-TGCTCGTG 282474 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 | || || || |||||||||| ||||| |||||| | || || || | | | Sbjct 282475 ATCTTTTCTATGCCTTGTGGATTCCCGACCTGTTCATGAAGCGCGTCGAACAGAATGGCG 282534 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780 | ||| || |||||||| |||||||||| || || | | |||||||||| |||| Sbjct 282535 ACTGGACTCTCATGTGCCCTCACGAGTGCCCTGGTCTTGCCGATATCTACGGTGACGAGT 282594 Query 53781 T 53781 | Sbjct 282595 T 282595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547208886192000