Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq176 96.9 3e-15 >seq176 Length=404529 Score = 96.9 bits (106), Expect = 3e-15 Identities = 263/399 (66%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 30062 ACGTAAAACTGAC---ACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| |||||| ||||| ||||| || || || ||||| ||||||| Sbjct 205123 ACGTAGAACTGAGCAAACATG---TGGCAAGGGGGGAGGGCCATTTTCGTCAAGTCTGCA 205179 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 || ||||| || | || |||||| || | || | || |||||| | | ||||| | Sbjct 205180 GGATTCCATGCACTCAAGATGATTCGGCGATCGTAAGGCTTGTTCTTCAGTTTGTCCATG 205239 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 || | ||| |||||||| || || | || |||| ||| ||| ||||| Sbjct 205240 ATGTCTGCCAGTTGATCCACGCCTTGACCGGTATAATCTGTCCTTGCATCCACATACTCG 205299 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 ||||| ||||| | ||| ||||||||||| |||||||| ||||| || ||||| | ||| Sbjct 205300 GCTCCAAAATGTCGCCATTGGAACCCGTAGACCGGTCCAAGGTCACCTTCTTCACGGTG- 205358 Query 30299 TCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 | || || | |||| | | | || | | ||||| |||||||||| || | || Sbjct 205359 GCTTAGACCGACGCTGTCGAGATATTCGCGGCTGCCGTTTCCGTCCCAGATTTTGATGCC 205418 Query 30358 CTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30417 || || || || ||| || ||| | ||| |||||||| || || || | | Sbjct 205419 CTGGTCCGAAAGTGGTTTCGAAGACGTGCATCCTGCAACGAACCAGAGTAGTTCAGCAAT 205478 Query 30418 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || || | ||||| ||||| || ||||| || || Sbjct 205479 TACAGCACGTAAGAAGACTCTCTTTGTGGTGAGAAGTGG 205517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305250015680