Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq264 104 1e-17 >seq264 Length=644297 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||||||| ||||| || ||||| || || || | || || Sbjct 590777 AGACGTAGGACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGG 590836 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||||||||| || ||||| || || || ||||| ||||| || || | |||||| Sbjct 590837 CCATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCC 590896 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || || ||||| | || |||||| ||| || |||| ||| Sbjct 590897 TTGTCCTGGATC-TTGGTCTTAACATTGTCGATAGTGTCTGATGACTCAACCTCCAAGGT 590955 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || || || |||||||| Sbjct 590956 GATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 590994 Score = 86.0 bits (94), Expect = 4e-12 Identities = 131/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| |||||| || ||||| || ||||| || ||||| | || || || || Sbjct 591020 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCATCCTCGAGCTGC 591079 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || || ||||| ||||| || || | ||||||||||||| ||| || Sbjct 591080 TTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT-TGAATCTT 591138 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTCCACTTCCACGGTTATCGTTTTACC 34679 || || ||| | || ||| ||||| ||| || || | ||| ||||| || || Sbjct 591139 GGTCTTGACGTTGTCGATGGTG---TCGCTAGACTCAACCTCAAGGGTGATCGTCTTTCC 591195 Query 34680 GGT 34682 ||| Sbjct 591196 GGT 591198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725610802320